RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 HBBP68871 147 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 KIR2DL4Q99706 377 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
GABPB1-210ENST00000560825 C1orf196B1AJZ1 125 aa6.92□□□□□ -1.3
GABPB1-210ENST00000560825 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
GABPB1-210ENST00000560825 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
GABPB1-210ENST00000560825 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
GABPB1-210ENST00000560825 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
GABPB1-210ENST00000560825 LINC00862A6NCI5 91 aa6.91□□□□□ -1.3
GABPB1-210ENST00000560825 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
GABPB1-210ENST00000560825 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
GABPB1-210ENST00000560825 LPAP08519 4548 aa6.9□□□□□ -1.3
GABPB1-210ENST00000560825 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 FAM168BA1KXE4 195 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 PPP1R2P9O14990 202 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 MALP21145 153 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 C7orf33Q8WU49 177 aa6.9□□□□□ -1.31
GABPB1-210ENST00000560825 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.31
GABPB1-210ENST00000560825 LOC389332A0A1B0GUA5 103 aa6.89□□□□□ -1.31
GABPB1-210ENST00000560825 PPP1R17O96001 155 aa6.89□□□□□ -1.31
GABPB1-210ENST00000560825 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
GABPB1-210ENST00000560825 TMEM136Q6ZRR5 245 aa6.89□□□□□ -1.31
GABPB1-210ENST00000560825 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
GABPB1-210ENST00000560825 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
GABPB1-210ENST00000560825 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 A0A1B0GW15 77 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
GABPB1-210ENST00000560825 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
GABPB1-210ENST00000560825 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 APOMO95445 188 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
GABPB1-210ENST00000560825 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
GABPB1-210ENST00000560825 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-210ENST00000560825 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
GABPB1-210ENST00000560825 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 F8W036 122 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 Q6ZRP5 223 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
GABPB1-210ENST00000560825 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 IFITM2Q01629 132 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 C2orf82Q6UX34 121 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 LINC00474Q9P2X8 69 aa6.85□□□□□ -1.31
GABPB1-210ENST00000560825 PRSS47A8MTI9 375 aa6.84□□□□□ -1.31
GABPB1-210ENST00000560825 TMEM18Q96B42 140 aa6.84□□□□□ -1.31
GABPB1-210ENST00000560825 PPBPP02775 128 aa6.84□□□□□ -1.32
GABPB1-210ENST00000560825 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.32
GABPB1-210ENST00000560825 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.32
GABPB1-210ENST00000560825 S100A8P05109 93 aa6.83□□□□□ -1.32
GABPB1-210ENST00000560825 UBE2D1P51668 147 aa6.83□□□□□ -1.32
GABPB1-210ENST00000560825 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
GABPB1-210ENST00000560825 MRPL35Q9NZE8 188 aaKnown RBP6.83□□□□□ -1.32
GABPB1-210ENST00000560825 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
GABPB1-210ENST00000560825 A0A087WZ39 114 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
GABPB1-210ENST00000560825 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 C2orf66Q6UXQ4 117 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
GABPB1-210ENST00000560825 Q8N8P6 123 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 AMELXQ99217 191 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
GABPB1-210ENST00000560825 IGIPA6NJ69 53 aa6.81□□□□□ -1.32
GABPB1-210ENST00000560825 RAB5AP20339 215 aa6.81□□□□□ -1.32
GABPB1-210ENST00000560825 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
GABPB1-210ENST00000560825 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
GABPB1-210ENST00000560825 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
GABPB1-210ENST00000560825 NDUFA1O15239 70 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 MT-ND4LP03901 98 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
GABPB1-210ENST00000560825 C1orf137Q5JT78 98 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 ANAPC16Q96DE5 110 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 MAP1LC3AQ9H492 121 aa6.8□□□□□ -1.32
GABPB1-210ENST00000560825 TGIF2-C20orf24A0A0A6YYL0 155 aa6.79□□□□□ -1.32
GABPB1-210ENST00000560825 TLX1NBP0CAT3 122 aa6.79□□□□□ -1.32
GABPB1-210ENST00000560825 MT-ND6P03923 174 aa6.78□□□□□ -1.32
GABPB1-210ENST00000560825 TEX43Q6ZNM6 134 aa6.78□□□□□ -1.32
GABPB1-210ENST00000560825 LINC00469Q8N7U9 141 aa6.77□□□□□ -1.33
GABPB1-210ENST00000560825 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
GABPB1-210ENST00000560825 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
GABPB1-210ENST00000560825 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms