RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 CHCHD5Q9BSY4 110 aa17.52■□□□□ 0.39
SHF-208ENST00000560734 A0A0J9YXY3 114 aa17.51■□□□□ 0.39
SHF-208ENST00000560734 SPINK8P0C7L1 97 aa17.51■□□□□ 0.39
SHF-208ENST00000560734 RPL24P83731 157 aaKnown RBP17.51■□□□□ 0.39
SHF-208ENST00000560734 COX6A2Q02221 97 aa17.51■□□□□ 0.39
SHF-208ENST00000560734 NDUFA12Q9UI09 145 aa17.51■□□□□ 0.39
SHF-208ENST00000560734 A0A1B0GUV1 79 aa17.5■□□□□ 0.39
SHF-208ENST00000560734 GAGE6Q13070 117 aa17.5■□□□□ 0.39
SHF-208ENST00000560734 TRAV13-1A0A0B4J241 112 aa17.5■□□□□ 0.39
SHF-208ENST00000560734 CFC1BP0CG36 223 aa17.49■□□□□ 0.39
SHF-208ENST00000560734 CFC1P0CG37 223 aa17.49■□□□□ 0.39
SHF-208ENST00000560734 SH2D6Q7Z4S9 175 aa17.49■□□□□ 0.39
SHF-208ENST00000560734 DEFB4AO15263 64 aa17.48■□□□□ 0.39
SHF-208ENST00000560734 TIMM17BO60830 172 aa17.48■□□□□ 0.39
SHF-208ENST00000560734 TSPAN13O95857 204 aa17.48■□□□□ 0.39
SHF-208ENST00000560734 G3V4G9 280 aa17.47■□□□□ 0.39
SHF-208ENST00000560734 NDUFA1O15239 70 aa17.47■□□□□ 0.39
SHF-208ENST00000560734 CELA1Q9UNI1 258 aa17.47■□□□□ 0.39
SHF-208ENST00000560734 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.47■□□□□ 0.39
SHF-208ENST00000560734 A0A0B4J2C4 111 aa17.47■□□□□ 0.39
SHF-208ENST00000560734 PRO1854Q9UHT4 67 aa17.47■□□□□ 0.39
SHF-208ENST00000560734 F5H768 121 aa17.46■□□□□ 0.39
SHF-208ENST00000560734 SPANXDQ9BXN6 97 aa17.46■□□□□ 0.39
SHF-208ENST00000560734 SPANXCQ9NY87 97 aa17.46■□□□□ 0.39
SHF-208ENST00000560734 SMIM1B2RUZ4 78 aa17.45■□□□□ 0.38
SHF-208ENST00000560734 APOMO95445 188 aa17.45■□□□□ 0.38
SHF-208ENST00000560734 IGLV4-60A0A075B6I1 120 aa17.44■□□□□ 0.38
SHF-208ENST00000560734 TRBV20-1A0A075B6N2 111 aa17.44■□□□□ 0.38
SHF-208ENST00000560734 LITAFQ99732 161 aa17.44■□□□□ 0.38
SHF-208ENST00000560734 TRRAPQ9Y4A5 3859 aa17.43■□□□□ 0.38
SHF-208ENST00000560734 H3BMG7 143 aa17.43■□□□□ 0.38
SHF-208ENST00000560734 RNF151Q2KHN1 245 aa17.43■□□□□ 0.38
SHF-208ENST00000560734 MRPL23Q16540 153 aaKnown RBP17.42■□□□□ 0.38
SHF-208ENST00000560734 PRO0461Q9UI25 63 aa17.42■□□□□ 0.38
SHF-208ENST00000560734 STAB1Q9NY15 2570 aa17.42■□□□□ 0.38
SHF-208ENST00000560734 A4D1N5 150 aa17.41■□□□□ 0.38
SHF-208ENST00000560734 MUSTN1Q8IVN3 82 aa17.41■□□□□ 0.38
SHF-208ENST00000560734 VPS25Q9BRG1 176 aa17.41■□□□□ 0.38
SHF-208ENST00000560734 C11orf68Q9H3H3 251 aaKnown RBP17.41■□□□□ 0.38
SHF-208ENST00000560734 IGHV3OR16-9A0A0B4J2B5 98 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 H3BNG1 76 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 IFITM1P13164 125 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 HERV-K104P63124 156 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 CIRBPQ14011 172 aaKnown RBP17.37■□□□□ 0.37
SHF-208ENST00000560734 MIAQ16674 131 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 ICOSQ9Y6W8 199 aa17.37■□□□□ 0.37
SHF-208ENST00000560734 IGHV3-33P01772 117 aa17.36■□□□□ 0.37
SHF-208ENST00000560734 WFDC2Q14508 124 aa17.36■□□□□ 0.37
SHF-208ENST00000560734 LOC107984156A0A0G2JMH3 177 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 LINC00959A0A1B0GUT2 108 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 TMEM262E9PQX1 116 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 J3QR89 54 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 ARL17AQ8IVW1 177 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 LINC01561Q8N1V8 128 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 ZNF625Q96I27 306 aaPredicted RBP17.35■□□□□ 0.37
SHF-208ENST00000560734 ERG28Q9UKR5 140 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 NBEAL2Q6ZNJ1 2754 aa17.35■□□□□ 0.37
SHF-208ENST00000560734 A0A087WZ39 114 aa17.34■□□□□ 0.37
SHF-208ENST00000560734 PPDPFQ9H3Y8 114 aa17.33■□□□□ 0.37
SHF-208ENST00000560734 Q9H8V8 135 aa17.33■□□□□ 0.37
SHF-208ENST00000560734 SS18Q15532 418 aa17.33■□□□□ 0.36
SHF-208ENST00000560734 LELP1Q5T871 98 aa17.33■□□□□ 0.36
SHF-208ENST00000560734 ADAMTSL4-AS1Q5T5F5 129 aa17.32■□□□□ 0.36
SHF-208ENST00000560734 COPS9Q8WXC6 57 aa17.32■□□□□ 0.36
SHF-208ENST00000560734 SFTA2Q6UW10 78 aa17.31■□□□□ 0.36
SHF-208ENST00000560734 A0A096LPF7 62 aa17.3■□□□□ 0.36
SHF-208ENST00000560734 EIF4EBP3O60516 100 aaPredicted RBP17.3■□□□□ 0.36
SHF-208ENST00000560734 PSMB2P49721 201 aa17.3■□□□□ 0.36
SHF-208ENST00000560734 COX7B2Q8TF08 81 aa17.29■□□□□ 0.36
SHF-208ENST00000560734 M0QXV9 152 aa17.28■□□□□ 0.36
SHF-208ENST00000560734 PRSS2P07478 247 aa17.28■□□□□ 0.36
SHF-208ENST00000560734 HTN3P15516 51 aa17.28■□□□□ 0.36
SHF-208ENST00000560734 TCL1BO95988 128 aa17.27■□□□□ 0.36
SHF-208ENST00000560734 RETNQ9HD89 108 aa17.27■□□□□ 0.36
SHF-208ENST00000560734 IGKV3OR2-268A0A0C4DH90 116 aa17.27■□□□□ 0.35
SHF-208ENST00000560734 TRBV30A0A0K0K1B3 111 aa17.27■□□□□ 0.35
SHF-208ENST00000560734 SCGB1C2P0DMR2 95 aa17.27■□□□□ 0.35
SHF-208ENST00000560734 ETDBQ3ZM63 59 aa17.26■□□□□ 0.35
SHF-208ENST00000560734 PCP4P48539 62 aa17.24■□□□□ 0.35
SHF-208ENST00000560734 CMYA5Q8N3K9 4069 aa17.23■□□□□ 0.35
SHF-208ENST00000560734 SMCPP49901 116 aaPredicted RBP17.22■□□□□ 0.35
SHF-208ENST00000560734 FBN3Q75N90 2809 aa17.22■□□□□ 0.35
SHF-208ENST00000560734 CD164L2Q6UWJ8 174 aa17.21■□□□□ 0.35
SHF-208ENST00000560734 LYPD5Q6UWN5 251 aa17.21■□□□□ 0.35
SHF-208ENST00000560734 LINC01600Q96MT4 127 aa17.21■□□□□ 0.35
SHF-208ENST00000560734 DNAH3Q8TD57 4116 aa17.2■□□□□ 0.34
SHF-208ENST00000560734 ANK2Q01484 3957 aa17.2■□□□□ 0.34
SHF-208ENST00000560734 LINC00269Q8N2A0 174 aa17.2■□□□□ 0.34
SHF-208ENST00000560734 REG3AQ06141 175 aa17.19■□□□□ 0.34
SHF-208ENST00000560734 MEIG1Q5JSS6 88 aa17.19■□□□□ 0.34
SHF-208ENST00000560734 LINC00308Q8TCZ7 52 aa17.19■□□□□ 0.34
SHF-208ENST00000560734 ANGP03950 147 aaKnown RBP17.18■□□□□ 0.34
SHF-208ENST00000560734 C5orf38Q86SI9 138 aa17.18■□□□□ 0.34
SHF-208ENST00000560734 XCL1P47992 114 aa17.18■□□□□ 0.34
SHF-208ENST00000560734 ATXN8Q156A1 80 aa17.18■□□□□ 0.34
SHF-208ENST00000560734 Q1RN00 199 aa17.18■□□□□ 0.34
SHF-208ENST00000560734 KPRPQ5T749 579 aaPredicted RBP17.18■□□□□ 0.34
SHF-208ENST00000560734 Q6ZTC4 211 aa17.17■□□□□ 0.34
SHF-208ENST00000560734 Q8IZM0 81 aa17.17■□□□□ 0.34
SHF-208ENST00000560734 SPATA25Q9BR10 227 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms