RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 HBBP68871 147 aa11.42□□□□□ -0.58
TPM1-224ENST00000560615 PEA15Q15121 130 aa11.42□□□□□ -0.58
TPM1-224ENST00000560615 ORAOV1Q8WV07 137 aa11.42□□□□□ -0.58
TPM1-224ENST00000560615 PSORS1C2Q9UIG4 136 aa11.42□□□□□ -0.58
TPM1-224ENST00000560615 PPBPP02775 128 aa11.41□□□□□ -0.58
TPM1-224ENST00000560615 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
TPM1-224ENST00000560615 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
TPM1-224ENST00000560615 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
TPM1-224ENST00000560615 SMIM2Q9BVW6 85 aa11.41□□□□□ -0.58
TPM1-224ENST00000560615 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
TPM1-224ENST00000560615 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
TPM1-224ENST00000560615 RAB5AP20339 215 aa11.4□□□□□ -0.58
TPM1-224ENST00000560615 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
TPM1-224ENST00000560615 D6R8Y8 96 aa11.39□□□□□ -0.59
TPM1-224ENST00000560615 RPL39P62891 51 aaKnown RBP11.39□□□□□ -0.59
TPM1-224ENST00000560615 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
TPM1-224ENST00000560615 IFI27P40305 119 aaPredicted RBP11.38□□□□□ -0.59
TPM1-224ENST00000560615 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
TPM1-224ENST00000560615 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
TPM1-224ENST00000560615 MRPL54Q6P161 138 aaKnown RBP11.37□□□□□ -0.59
TPM1-224ENST00000560615 A0A087WZ39 114 aa11.36□□□□□ -0.59
TPM1-224ENST00000560615 TLX1NBP0CAT3 122 aa11.36□□□□□ -0.59
TPM1-224ENST00000560615 ODF1Q14990 250 aa11.35□□□□□ -0.59
TPM1-224ENST00000560615 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
TPM1-224ENST00000560615 TNXBP22105 4242 aa11.35□□□□□ -0.59
TPM1-224ENST00000560615 NPYP01303 97 aa11.34□□□□□ -0.59
TPM1-224ENST00000560615 IGLV7-43P04211 117 aa11.34□□□□□ -0.59
TPM1-224ENST00000560615 TMEM136Q6ZRR5 245 aa11.33□□□□□ -0.6
TPM1-224ENST00000560615 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
TPM1-224ENST00000560615 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
TPM1-224ENST00000560615 A0A1B0GXF2 115 aa11.32□□□□□ -0.6
TPM1-224ENST00000560615 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
TPM1-224ENST00000560615 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
TPM1-224ENST00000560615 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
TPM1-224ENST00000560615 PRELID3AQ96N28 172 aa11.32□□□□□ -0.6
TPM1-224ENST00000560615 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
TPM1-224ENST00000560615 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 C9JQL5 133 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 C2orf88Q9BSF0 95 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 LRP2P98164 4655 aa11.31□□□□□ -0.6
TPM1-224ENST00000560615 UBE2BP63146 152 aa11.3□□□□□ -0.6
TPM1-224ENST00000560615 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
TPM1-224ENST00000560615 Q6ZN92 141 aa11.3□□□□□ -0.6
TPM1-224ENST00000560615 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
TPM1-224ENST00000560615 FAM19A5Q7Z5A7 132 aaPredicted RBP11.3□□□□□ -0.6
TPM1-224ENST00000560615 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
TPM1-224ENST00000560615 H0Y9J4 135 aa11.28□□□□□ -0.6
TPM1-224ENST00000560615 SRSF3P84103 164 aaKnown RBP11.28□□□□□ -0.6
TPM1-224ENST00000560615 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
TPM1-224ENST00000560615 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
TPM1-224ENST00000560615 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
TPM1-224ENST00000560615 IGLV1-50A0A075B6I6 118 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 FAM168BA1KXE4 195 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 M0QXV9 152 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 PRSS2P07478 247 aa11.27□□□□□ -0.61
TPM1-224ENST00000560615 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
TPM1-224ENST00000560615 CYSLTR1Q9Y271 337 aa11.26□□□□□ -0.61
TPM1-224ENST00000560615 UBE2D1P51668 147 aa11.25□□□□□ -0.61
TPM1-224ENST00000560615 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
TPM1-224ENST00000560615 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
TPM1-224ENST00000560615 VCX2Q9H322 139 aa11.25□□□□□ -0.61
TPM1-224ENST00000560615 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
TPM1-224ENST00000560615 NPSP0C0P6 89 aa11.24□□□□□ -0.61
TPM1-224ENST00000560615 G0S2P27469 103 aa11.24□□□□□ -0.61
TPM1-224ENST00000560615 CKS1BP61024 79 aa11.24□□□□□ -0.61
TPM1-224ENST00000560615 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
TPM1-224ENST00000560615 K7EMI3 77 aa11.23□□□□□ -0.61
TPM1-224ENST00000560615 SEC11AP67812 179 aa11.23□□□□□ -0.61
TPM1-224ENST00000560615 PNRC1Q12796 327 aaPredicted RBP11.23□□□□□ -0.61
TPM1-224ENST00000560615 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
TPM1-224ENST00000560615 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
TPM1-224ENST00000560615 C6orf226Q5I0X4 101 aa11.22□□□□□ -0.61
TPM1-224ENST00000560615 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
TPM1-224ENST00000560615 C2orf66Q6UXQ4 117 aa11.22□□□□□ -0.61
TPM1-224ENST00000560615 Q8N8P6 123 aa11.22□□□□□ -0.61
TPM1-224ENST00000560615 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
TPM1-224ENST00000560615 MT-ND4LP03901 98 aa11.21□□□□□ -0.61
TPM1-224ENST00000560615 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
TPM1-224ENST00000560615 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
TPM1-224ENST00000560615 KRTAP11-1Q8IUC1 163 aa11.19□□□□□ -0.62
TPM1-224ENST00000560615 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
TPM1-224ENST00000560615 NUPR1O60356 82 aa11.18□□□□□ -0.62
TPM1-224ENST00000560615 HERVK_113P63121 156 aa11.18□□□□□ -0.62
TPM1-224ENST00000560615 Q8IZM0 81 aa11.18□□□□□ -0.62
TPM1-224ENST00000560615 AMELXQ99217 191 aa11.18□□□□□ -0.62
TPM1-224ENST00000560615 ALKBH7Q9BT30 221 aaPredicted RBP11.18□□□□□ -0.62
TPM1-224ENST00000560615 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
TPM1-224ENST00000560615 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
TPM1-224ENST00000560615 RNF213Q63HN8 5207 aa11.17□□□□□ -0.62
TPM1-224ENST00000560615 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
TPM1-224ENST00000560615 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
TPM1-224ENST00000560615 CTDSP1Q9GZU7 261 aa11.16□□□□□ -0.62
TPM1-224ENST00000560615 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
TPM1-224ENST00000560615 A0A1B0GVG6 124 aa11.15□□□□□ -0.62
TPM1-224ENST00000560615 ZNF861PO60384 105 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms