RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 RPL32P62910 135 aaKnown RBP10.76□□□□□ -0.69
TSPAN3-208ENST00000560514 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
TSPAN3-208ENST00000560514 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
TSPAN3-208ENST00000560514 COX7A2LO14548 114 aa10.75□□□□□ -0.69
TSPAN3-208ENST00000560514 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
TSPAN3-208ENST00000560514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
TSPAN3-208ENST00000560514 LCE2AQ5TA79 106 aaPredicted RBP10.74□□□□□ -0.69
TSPAN3-208ENST00000560514 UBE2D4Q9Y2X8 147 aa10.74□□□□□ -0.69
TSPAN3-208ENST00000560514 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
TSPAN3-208ENST00000560514 S100A8P05109 93 aa10.73□□□□□ -0.69
TSPAN3-208ENST00000560514 ADIRFQ15847 76 aa10.73□□□□□ -0.69
TSPAN3-208ENST00000560514 MRPL51Q4U2R6 128 aaKnown RBP10.73□□□□□ -0.69
TSPAN3-208ENST00000560514 C9JQL5 133 aa10.72□□□□□ -0.69
TSPAN3-208ENST00000560514 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
TSPAN3-208ENST00000560514 OPRPNQ99935 248 aaPredicted RBP10.72□□□□□ -0.69
TSPAN3-208ENST00000560514 F8W036 122 aa10.71□□□□□ -0.69
TSPAN3-208ENST00000560514 CKS2P33552 79 aa10.71□□□□□ -0.69
TSPAN3-208ENST00000560514 PPBPP02775 128 aa10.69□□□□□ -0.7
TSPAN3-208ENST00000560514 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
TSPAN3-208ENST00000560514 A0A1B0GVG6 124 aa10.68□□□□□ -0.7
TSPAN3-208ENST00000560514 F8WDY8 70 aa10.68□□□□□ -0.7
TSPAN3-208ENST00000560514 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
TSPAN3-208ENST00000560514 SRSF3P84103 164 aaKnown RBP10.68□□□□□ -0.7
TSPAN3-208ENST00000560514 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
TSPAN3-208ENST00000560514 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
TSPAN3-208ENST00000560514 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
TSPAN3-208ENST00000560514 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
TSPAN3-208ENST00000560514 A0A1B0GXF2 115 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 LCE2BO14633 110 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 TSPAN13O95857 204 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 UBE2BP63146 152 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 HBBP68871 147 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 CARHSP1Q9Y2V2 147 aaKnown RBP10.66□□□□□ -0.7
TSPAN3-208ENST00000560514 ATP5L2Q7Z4Y8 100 aa10.65□□□□□ -0.7
TSPAN3-208ENST00000560514 SMIM2Q9BVW6 85 aa10.65□□□□□ -0.7
TSPAN3-208ENST00000560514 FAM168BA1KXE4 195 aa10.64□□□□□ -0.71
TSPAN3-208ENST00000560514 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
TSPAN3-208ENST00000560514 D6R8Y8 96 aa10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 RNASE13Q5GAN3 156 aaKnown RBP10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 MRPL54Q6P161 138 aaKnown RBP10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 Q6ZUT4 128 aa10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 KRTAP11-1Q8IUC1 163 aa10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
TSPAN3-208ENST00000560514 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
TSPAN3-208ENST00000560514 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 NDUFA1O15239 70 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 RAB5AP20339 215 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
TSPAN3-208ENST00000560514 M0QXV9 152 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 NPYP01303 97 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 LAMTOR2Q9Y2Q5 125 aa10.6□□□□□ -0.71
TSPAN3-208ENST00000560514 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
TSPAN3-208ENST00000560514 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
TSPAN3-208ENST00000560514 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
TSPAN3-208ENST00000560514 IFI27P40305 119 aaPredicted RBP10.57□□□□□ -0.72
TSPAN3-208ENST00000560514 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
TSPAN3-208ENST00000560514 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
TSPAN3-208ENST00000560514 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
TSPAN3-208ENST00000560514 LINC01561Q8N1V8 128 aa10.55□□□□□ -0.72
TSPAN3-208ENST00000560514 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
TSPAN3-208ENST00000560514 ZNF861PO60384 105 aa10.54□□□□□ -0.72
TSPAN3-208ENST00000560514 NPSP0C0P6 89 aa10.54□□□□□ -0.72
TSPAN3-208ENST00000560514 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
TSPAN3-208ENST00000560514 K7EMI3 77 aa10.53□□□□□ -0.72
TSPAN3-208ENST00000560514 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
TSPAN3-208ENST00000560514 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
TSPAN3-208ENST00000560514 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
TSPAN3-208ENST00000560514 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
TSPAN3-208ENST00000560514 RAB14P61106 215 aa10.52□□□□□ -0.73
TSPAN3-208ENST00000560514 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
TSPAN3-208ENST00000560514 Q8N8P6 123 aa10.52□□□□□ -0.73
TSPAN3-208ENST00000560514 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.73
TSPAN3-208ENST00000560514 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
TSPAN3-208ENST00000560514 IGLV4-3A0A075B6K6 122 aa10.51□□□□□ -0.73
TSPAN3-208ENST00000560514 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
TSPAN3-208ENST00000560514 G0S2P27469 103 aa10.5□□□□□ -0.73
TSPAN3-208ENST00000560514 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
TSPAN3-208ENST00000560514 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
TSPAN3-208ENST00000560514 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
TSPAN3-208ENST00000560514 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 NUPR1O60356 82 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 CRYGAP11844 174 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
TSPAN3-208ENST00000560514 Q6ZN92 141 aa10.48□□□□□ -0.73
TSPAN3-208ENST00000560514 AMELXQ99217 191 aa10.48□□□□□ -0.73
TSPAN3-208ENST00000560514 VCX2Q9H322 139 aa10.48□□□□□ -0.73
TSPAN3-208ENST00000560514 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms