RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
SNRPA1-211ENST00000560433 LINC00269Q8N2A0 174 aa7.48□□□□□ -1.21
SNRPA1-211ENST00000560433 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
SNRPA1-211ENST00000560433 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 TEX48A0A1B0GUV7 120 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 ANGP03950 147 aaKnown RBP7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 LYPD5Q6UWN5 251 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 XCL1P47992 114 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 TIRAPP58753 221 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 HERVK_113P63121 156 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 HSD52Q0P140 79 aa7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 LBHQ53QV2 105 aaPredicted RBP7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 NAA38Q9BRA0 125 aaKnown RBP7.47□□□□□ -1.21
SNRPA1-211ENST00000560433 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 RAB37Q96AX2 223 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 HIGD1BQ9P298 99 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 CSMD3Q7Z407 3707 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 K7ERJ3 54 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 IGHV3-30P01768 117 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 SMAGPQ0VAQ4 97 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
SNRPA1-211ENST00000560433 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
SNRPA1-211ENST00000560433 SMIM1B2RUZ4 78 aa7.45□□□□□ -1.22
SNRPA1-211ENST00000560433 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
SNRPA1-211ENST00000560433 SRSF9Q13242 221 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNRPA1-211ENST00000560433 WFDC10BQ8IUB3 73 aa7.45□□□□□ -1.22
SNRPA1-211ENST00000560433 A0A0U1RRA0 63 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 CEND1Q8N111 149 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 A0A1B0GUV1 79 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 H3BRM9 83 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 CCL25O15444 150 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 NPC2P61916 151 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 ESRGQ1W209 222 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 LELP1Q5T871 98 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 TOMM7Q9P0U1 55 aa7.44□□□□□ -1.22
SNRPA1-211ENST00000560433 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 KLK12Q9UKR0 248 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 TAX1BP3O14907 124 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 SEC11AP67812 179 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 DAND5Q8N907 189 aa7.43□□□□□ -1.22
SNRPA1-211ENST00000560433 A0A0J9YXY3 114 aa7.42□□□□□ -1.22
SNRPA1-211ENST00000560433 REG3AQ06141 175 aa7.42□□□□□ -1.22
SNRPA1-211ENST00000560433 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
SNRPA1-211ENST00000560433 ADAMTSL4-AS1Q5T5F5 129 aa7.42□□□□□ -1.22
SNRPA1-211ENST00000560433 Q9H8V8 135 aa7.42□□□□□ -1.22
SNRPA1-211ENST00000560433 DNAH7Q8WXX0 4024 aa7.41□□□□□ -1.22
SNRPA1-211ENST00000560433 TENM2Q9NT68 2774 aa7.41□□□□□ -1.22
SNRPA1-211ENST00000560433 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
SNRPA1-211ENST00000560433 IGLL5B9A064 214 aa7.41□□□□□ -1.22
SNRPA1-211ENST00000560433 SS18Q15532 418 aa7.4□□□□□ -1.22
SNRPA1-211ENST00000560433 ZFAND6Q6FIF0 208 aa7.4□□□□□ -1.22
SNRPA1-211ENST00000560433 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
SNRPA1-211ENST00000560433 SH2D6Q7Z4S9 175 aa7.4□□□□□ -1.23
SNRPA1-211ENST00000560433 A6NDN8 102 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 PRSS2P07478 247 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 H3BNG1 76 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 EIF4EBP3O60516 100 aaPredicted RBP7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
SNRPA1-211ENST00000560433 APOMO95445 188 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 ENHOQ6UWT2 76 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 LITAFQ99732 161 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 A0A087WZ39 114 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 H3BUT2 72 aa7.38□□□□□ -1.23
SNRPA1-211ENST00000560433 SMIM13P0DJ93 91 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 TAL2Q16559 108 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 LINC00526Q96FQ7 95 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 NDUFA1O15239 70 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
SNRPA1-211ENST00000560433 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
SNRPA1-211ENST00000560433 PLECQ15149 4684 aaKnown RBP7.36□□□□□ -1.23
SNRPA1-211ENST00000560433 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
SNRPA1-211ENST00000560433 TMEM238C9JI98 176 aa7.36□□□□□ -1.23
SNRPA1-211ENST00000560433 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
SNRPA1-211ENST00000560433 A4D1N5 150 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 VAMP3Q15836 100 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 CRPP02741 224 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 MALP21145 153 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 C6orf226Q5I0X4 101 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
SNRPA1-211ENST00000560433 FOXI1Q12951 378 aa7.34□□□□□ -1.23
SNRPA1-211ENST00000560433 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
SNRPA1-211ENST00000560433 COX7A2LO14548 114 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 CFC1BP0CG36 223 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 CFC1P0CG37 223 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms