RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CDC42SE2Q9NRR3 84 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 FRYQ5TBA9 3013 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 NACAE9PAV3 2078 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 NBEAQ8NFP9 2946 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 TRBV6-4A0A1B0GX49 114 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 H7BZZ5 65 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 K7EQD1 137 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 LECT2O14960 151 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 MIR7-3HGQ8N6C7 128 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 C11orf72Q8NBR9 251 aa4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 URB1O60287 2271 aaKnown RBP4.18□□□□□ -1.74
SNRPA1-209ENST00000560307 SPTBN5Q9NRC6 3674 aaKnown RBP4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 VCANP13611 3396 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 LOC110117498A0A087WWA1 95 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 ERC2-IT1O76042 136 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 INSP01308 110 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 PDE6GP18545 87 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 CCL18P55774 89 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 SS18Q15532 418 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 C10orf105Q8TEF2 133 aa4.17□□□□□ -1.74
SNRPA1-209ENST00000560307 FRYLO94915 3013 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 IGHV3-73A0A0B4J1V6 119 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 NCR3O14931 201 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 CXCL6P80162 114 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 C9orf129Q5T035 196 aaKnown RBP4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 STHQ8IWL8 128 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 C20orf197Q8N268 126 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 MUC7Q8TAX7 377 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 WDFY3Q8IZQ1 3526 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 FREM2Q5SZK8 3169 aa4.16□□□□□ -1.74
SNRPA1-209ENST00000560307 SPEGQ15772 3267 aa4.15□□□□□ -1.74
SNRPA1-209ENST00000560307 IGHV3-38A0A0C4DH36 116 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 H3BUX3 64 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 UBE2L6O14933 153 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 LINC00158P58513 81 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 BLCAPP62952 87 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 C6orf223Q8N319 242 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 TMEM86BQ8N661 226 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 BPESC1Q9GZL8 116 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 C16orf95Q9H693 158 aa4.15□□□□□ -1.75
SNRPA1-209ENST00000560307 TRAV23DV6A0A075B6W5 121 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 A0A087WZ39 114 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 J3QLI3 93 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 CCL21O00585 134 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 DEFB131AP59861 70 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 HILS1P60008 231 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 C9orf66Q5T8R8 295 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 ENHOQ6UWT2 76 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 Q6ZQT0 140 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 NTM-AS1Q6ZSK4 140 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 Q8N814 137 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 CEP290O15078 2479 aa4.14□□□□□ -1.75
SNRPA1-209ENST00000560307 TNRC18O15417 2968 aaPredicted RBP4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 ABCA4P78363 2273 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 COX17Q14061 63 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 LY6EQ16553 131 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 UBE2E2Q96LR5 201 aa4.13□□□□□ -1.75
SNRPA1-209ENST00000560307 PKDREJQ9NTG1 2253 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 CD164L2Q6UWJ8 174 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 Q8IZM0 81 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 Q9UF83 564 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 LAMTOR3Q9UHA4 124 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 ZNF318Q5VUA4 2279 aa4.12□□□□□ -1.75
SNRPA1-209ENST00000560307 PRUNE2Q8WUY3 3088 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 F8WEM9 126 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 IGHV4-59P01825 116 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 NANOS2P60321 138 aaKnown RBP4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 BRD3OSQ6XYD6 125 aa4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
SNRPA1-209ENST00000560307 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 NBL1P41271 181 aa4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 LINC01547P58512 204 aaPredicted RBP4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 LINC00575Q6W349 94 aa4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 Q6ZVQ6 151 aa4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
SNRPA1-209ENST00000560307 VPS13AQ96RL7 3174 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 A0A096LNT2 108 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 TRGV1A0A0A0MS02 117 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 A0A1W2PPR1 153 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 MSMBP08118 114 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 MIFP14174 115 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 HTN1P15515 57 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 CMC4P56277 68 aaPredicted RBP4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 ZNF843Q8N446 348 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 DYNLRB2Q8TF09 96 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 V9GYY9 64 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms