RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
SPG11-211ENST00000558561 TRBV25-1A0A075B6N4 114 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 TRBV6-5A0A0K0K1A5 114 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 A0A1B0GXF2 115 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 TCAPO15273 167 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 NDUFS6O75380 124 aaKnown RBP2.7□□□□□ -1.98
SPG11-211ENST00000558561 NPYP01303 97 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 HLA-DQA1P01909 254 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 CHTF8P0CG12 524 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 FGF6P10767 208 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 RPL39P62891 51 aaKnown RBP2.7□□□□□ -1.98
SPG11-211ENST00000558561 RIGQ13278 110 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 COTL1Q14019 142 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 CLLU1Q5K131 121 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 RNASEKQ6P5S7 137 aaKnown RBP2.7□□□□□ -1.98
SPG11-211ENST00000558561 TMEM243Q9BU79 118 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 URGCP-MRPS24S4R325 110 aa2.7□□□□□ -1.98
SPG11-211ENST00000558561 SRRM2Q9UQ35 2752 aaKnown RBP2.7□□□□□ -1.98
SPG11-211ENST00000558561 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
SPG11-211ENST00000558561 LOC389332A0A1B0GUA5 103 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 TMEM218A2RU14 115 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 D6R8Y8 96 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 H7C1H1 209 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 I3L3M4 83 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 K7EP13 123 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 HNRNPA3P51991 378 aaKnown RBP2.69□□□□□ -1.98
SPG11-211ENST00000558561 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
SPG11-211ENST00000558561 LAGE3Q14657 143 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 HIGD2BQ4VC39 106 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 SDIM1Q6ZPB5 146 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 C15orf56Q8N910 161 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 IMMP2LQ96T52 175 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 ST20Q9HBF5 79 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 CDC42SE2Q9NRR3 84 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 NAT8BQ9UHF3 227 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
SPG11-211ENST00000558561 TRBV27A0A0K0K1C4 114 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 LINC00959A0A1B0GUT2 108 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 RPL37AP8A6NKH3 93 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 APCSP02743 223 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 CKS2P33552 79 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 COX6A2Q02221 97 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 Q0VG73 95 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 ELOBQ15370 118 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 MIAQ16674 131 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 Q5VSD8 79 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 TMEM136Q6ZRR5 245 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 Q6ZSA8 131 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 SCXQ7RTU7 201 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 SMIM15Q7Z3B0 74 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 CHCHD10Q8WYQ3 142 aaPredicted RBP2.68□□□□□ -1.98
SPG11-211ENST00000558561 SMDT1Q9H4I9 107 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 UBE2D4Q9Y2X8 147 aa2.68□□□□□ -1.98
SPG11-211ENST00000558561 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 A0A0J9YXV3 536 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 F8W036 122 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 UBE2L6O14933 153 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 CCL25O15444 150 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 CRPP02741 224 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 XCL1P47992 114 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 RAB14P61106 215 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 TMEM97Q5BJF2 176 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 AMMECR1LQ6DCA0 310 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 KCNIP4Q6PIL6 250 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 Q6ZUT4 128 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 C5orf38Q86SI9 138 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 COMMD7Q86VX2 200 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 SLC7A5P1Q8MH63 180 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 ZNF664Q8N3J9 261 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 C9orf163Q8N9P6 203 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 OR5A1Q8NGJ0 315 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 BORCS7Q96B45 105 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 MRAP2Q96G30 205 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 OCR1Q9BZK8 76 aa2.67□□□□□ -1.98
SPG11-211ENST00000558561 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 C7orf77A4D0Y5 90 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 LINC00862A6NCI5 91 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 IFI27P40305 119 aaPredicted RBP2.66□□□□□ -1.98
SPG11-211ENST00000558561 HBBP68871 147 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 C10orf91Q5T1B1 145 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 REG3GQ6UW15 175 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 FRZBQ92765 325 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 RMI2Q96E14 147 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 PRELID3AQ96N28 172 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 CHAC1Q9BUX1 264 aa2.66□□□□□ -1.98
SPG11-211ENST00000558561 TGIF2-C20orf24A0A0A6YYL0 155 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 TRAV8-4A0A0B4J246 113 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 MT-ND4LP03901 98 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 FCER1GP30273 86 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 MRPL52Q86TS9 123 aaKnown RBP2.65□□□□□ -1.99
SPG11-211ENST00000558561 KRTAP11-1Q8IUC1 163 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.65□□□□□ -1.99
SPG11-211ENST00000558561 C20orf78Q9BR46 151 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 SMIM2Q9BVW6 85 aa2.65□□□□□ -1.99
SPG11-211ENST00000558561 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms