RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 RPL18AQ02543 176 aaKnown RBP8.8□□□□□ -1
SNX6-210ENST00000557341 REG3GQ6UW15 175 aa8.8□□□□□ -1
SNX6-210ENST00000557341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
SNX6-210ENST00000557341 MRPS36P82909 103 aaKnown RBP8.79□□□□□ -1
SNX6-210ENST00000557341 ATP5L2Q7Z4Y8 100 aa8.79□□□□□ -1
SNX6-210ENST00000557341 A0A0J9YXV3 536 aa8.78□□□□□ -1
SNX6-210ENST00000557341 IFITM10A6NMD0 228 aa8.78□□□□□ -1
SNX6-210ENST00000557341 ORMDL3Q8N138 153 aa8.78□□□□□ -1
SNX6-210ENST00000557341 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
SNX6-210ENST00000557341 FAM104AQ969W3 186 aa8.78□□□□□ -1
SNX6-210ENST00000557341 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1.01
SNX6-210ENST00000557341 A0A1W2PNN7 141 aa8.77□□□□□ -1.01
SNX6-210ENST00000557341 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
SNX6-210ENST00000557341 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
SNX6-210ENST00000557341 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
SNX6-210ENST00000557341 MRPL35Q9NZE8 188 aaKnown RBP8.77□□□□□ -1.01
SNX6-210ENST00000557341 F8WDY8 70 aa8.76□□□□□ -1.01
SNX6-210ENST00000557341 RAB5AP20339 215 aa8.76□□□□□ -1.01
SNX6-210ENST00000557341 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
SNX6-210ENST00000557341 TGIF2-C20orf24A0A0A6YYL0 155 aa8.75□□□□□ -1.01
SNX6-210ENST00000557341 NDUFA1O15239 70 aa8.75□□□□□ -1.01
SNX6-210ENST00000557341 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■■■■□ 24.7
SNX6-210ENST00000557341 PRELID3AQ96N28 172 aa8.75□□□□□ -1.01
SNX6-210ENST00000557341 MT-ND6P03923 174 aa8.74□□□□□ -1.01
SNX6-210ENST00000557341 TMEM136Q6ZRR5 245 aa8.74□□□□□ -1.01
SNX6-210ENST00000557341 IMMP2LQ96T52 175 aa8.74□□□□□ -1.01
SNX6-210ENST00000557341 PSORS1C2Q9UIG4 136 aa8.74□□□□□ -1.01
SNX6-210ENST00000557341 LRP2P98164 4655 aa8.73□□□□□ -1.01
SNX6-210ENST00000557341 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
SNX6-210ENST00000557341 LAMTOR2Q9Y2Q5 125 aa8.73□□□□□ -1.01
SNX6-210ENST00000557341 PYGO1Q9Y3Y4 419 aa8.73□□□□□ -1.01
SNX6-210ENST00000557341 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
SNX6-210ENST00000557341 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
SNX6-210ENST00000557341 TMEM141Q96I45 108 aa8.72□□□□□ -1.01
SNX6-210ENST00000557341 MAP1LC3AQ9H492 121 aa8.72□□□□□ -1.01
SNX6-210ENST00000557341 A0A087WZ39 114 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
SNX6-210ENST00000557341 LOC389332A0A1B0GUA5 103 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 PRSS47A8MTI9 375 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 ODF1Q14990 250 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 C1orf137Q5JT78 98 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 LINC00242Q5T6M2 205 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 C2orf88Q9BSF0 95 aa8.7□□□□□ -1.02
SNX6-210ENST00000557341 MT-ND4LP03901 98 aa8.69□□□□□ -1.02
SNX6-210ENST00000557341 Q6ZN92 141 aa8.69□□□□□ -1.02
SNX6-210ENST00000557341 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
SNX6-210ENST00000557341 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
SNX6-210ENST00000557341 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
SNX6-210ENST00000557341 Q8N8P6 123 aa8.68□□□□□ -1.02
SNX6-210ENST00000557341 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 UBE2D1P51668 147 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 RAB14P61106 215 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
SNX6-210ENST00000557341 K7EMI3 77 aa8.66□□□□□ -1.02
SNX6-210ENST00000557341 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
SNX6-210ENST00000557341 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
SNX6-210ENST00000557341 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 M0QXV9 152 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 NPSP0C0P6 89 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 LINC00173Q6ZV60 143 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
SNX6-210ENST00000557341 PRSS2P07478 247 aa8.64□□□□□ -1.03
SNX6-210ENST00000557341 AMELXQ99217 191 aa8.64□□□□□ -1.03
SNX6-210ENST00000557341 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
SNX6-210ENST00000557341 VCX2Q9H322 139 aa8.64□□□□□ -1.03
SNX6-210ENST00000557341 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
SNX6-210ENST00000557341 RNF213Q63HN8 5207 aa8.64□□□□□ -1.03
SNX6-210ENST00000557341 UBE2BP63146 152 aa8.63□□□□□ -1.03
SNX6-210ENST00000557341 ZC2HC1BQ5TFG8 222 aa8.63□□□□□ -1.03
SNX6-210ENST00000557341 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
SNX6-210ENST00000557341 H0Y9J4 135 aa8.62□□□□□ -1.03
SNX6-210ENST00000557341 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
SNX6-210ENST00000557341 KRTAP11-1Q8IUC1 163 aa8.62□□□□□ -1.03
SNX6-210ENST00000557341 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
SNX6-210ENST00000557341 G0S2P27469 103 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 CKS1BP61024 79 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 SEC11AP67812 179 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 FAM19A3Q7Z5A8 133 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 Q8IZM0 81 aa8.61□□□□□ -1.03
SNX6-210ENST00000557341 HERVK_113P63121 156 aa8.6□□□□□ -1.03
SNX6-210ENST00000557341 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
SNX6-210ENST00000557341 TIMM17AQ99595 171 aa8.6□□□□□ -1.03
SNX6-210ENST00000557341 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
SNX6-210ENST00000557341 CLLU1Q5K131 121 aa8.59□□□□□ -1.03
SNX6-210ENST00000557341 ALKBH7Q9BT30 221 aaPredicted RBP8.59□□□□□ -1.03
SNX6-210ENST00000557341 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
SNX6-210ENST00000557341 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms