RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
SLIRP-208ENST00000556956 DIDO1Q9BTC0 2240 aaKnown RBP2.03□□□□□ -2.08
SLIRP-208ENST00000556956 VPS13AQ96RL7 3174 aa2.03□□□□□ -2.08
SLIRP-208ENST00000556956 TNCP24821 2201 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 FAM236DA0A1B0GTK5 79 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 H3BUX3 64 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 K7ENP7 123 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 LECT2O14960 151 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 INSP01308 110 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 FAM236CP0DP71 79 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 UCNP55089 124 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 DEFB131AP59861 70 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 BLCAPP62952 87 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 C4orf26Q17RF5 130 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 LYPD5Q6UWN5 251 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 LINC01561Q8N1V8 128 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 KIR2DL5BQ8NHK3 375 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 TMEM243Q9BU79 118 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 UBL5Q9BZL1 73 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 BPESC1Q9GZL8 116 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 C14orf132Q9NPU4 83 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 WDFY4Q6ZS81 3184 aa2.02□□□□□ -2.09
SLIRP-208ENST00000556956 CACNA1HO95180 2353 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 IGKV2-28A0A075B6P5 120 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 SMIM26A0A096LP01 95 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 TRBV6-4A0A1B0GX49 114 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 K7EQD1 137 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 NCR3O14931 201 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 NDUFC1O43677 76 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 IGKV2D-28P01615 120 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 EDN2P20800 178 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 PFN2P35080 140 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 NBL1P41271 181 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 XCL1P47992 114 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 CCL18P55774 89 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 CMC4P56277 68 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-208ENST00000556956 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-208ENST00000556956 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 Q5XG85 94 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 BRD3OSQ6XYD6 125 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 SMIM29Q86T20 159 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 TMEM86BQ8N661 226 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 LINC00337Q8N6G1 96 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-208ENST00000556956 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 C10orf105Q8TEF2 133 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 UBE2E2Q96LR5 201 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 DSCR8Q96T75 97 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 XCL2Q9UBD3 114 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 PRO0628Q9UI54 55 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 DSCAML1Q8TD84 2053 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 TTC28Q96AY4 2481 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 SPEGQ15772 3267 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 FRYLO94915 3013 aa2.01□□□□□ -2.09
SLIRP-208ENST00000556956 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
SLIRP-208ENST00000556956 MUC6Q6W4X9 2439 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 ZNF292O60281 2723 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 AHCTF1Q8WYP5 2266 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 TRAV23DV6A0A075B6W5 121 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 A0A087WVE0 104 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 TRGV1A0A0A0MS02 117 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 EPM2AB3EWF7 344 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 LY6G6DO95868 133 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 OXTP01178 125 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 MSMBP08118 114 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 IGHV4-38-2P0DP08 117 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 PDE6GP18545 87 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 C6orf226Q5I0X4 101 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 ENHOQ6UWT2 76 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 C20orf197Q8N268 126 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 Q8N814 137 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 CYSTM1Q9H1C7 97 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 TOMM7Q9P0U1 55 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 Q9UF83 564 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 AGRNO00468 2067 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 CNTRLQ7Z7A1 2325 aa2□□□□□ -2.09
SLIRP-208ENST00000556956 GPR179Q6PRD1 2367 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 ZFHX4Q86UP3 3567 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 A0A087WZ39 114 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 IGHV4-61A0A0C4DH41 118 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 A0A1B0GVY2 172 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 B4DSR2 109 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 J3QLI3 93 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
SLIRP-208ENST00000556956 SS18Q15532 418 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 KRTAP13-3Q3SY46 172 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 C9orf129Q5T035 196 aaKnown RBP1.99□□□□□ -2.09
SLIRP-208ENST00000556956 FAM19A1Q7Z5A9 133 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 STHQ8IWL8 128 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms