RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 DNAH10Q8IVF4 4471 aa11□□□□□ -0.65
PCNX4-213ENST00000556907 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 CCL25O15444 150 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 SEC11AP67812 179 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 REG3AQ06141 175 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 MIAQ16674 131 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 UBE2WQ96B02 151 aa10.99□□□□□ -0.65
PCNX4-213ENST00000556907 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 TRAV13-1A0A0B4J241 112 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 CDPF1Q6NVV7 123 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 CLPSL2Q6UWE3 100 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 Q9HAA7 133 aa10.98□□□□□ -0.65
PCNX4-213ENST00000556907 HERVK_113P63121 156 aa10.97□□□□□ -0.65
PCNX4-213ENST00000556907 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
PCNX4-213ENST00000556907 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
PCNX4-213ENST00000556907 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 IGKV3OR2-268A0A0C4DH90 116 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 PSCAO43653 123 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.65
PCNX4-213ENST00000556907 SS18Q15532 418 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
PCNX4-213ENST00000556907 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PCNX4-213ENST00000556907 GEMIN7Q9H840 131 aaKnown RBP10.95□□□□□ -0.66
PCNX4-213ENST00000556907 FRAS1Q86XX4 4008 aa10.94□□□□□ -0.66
PCNX4-213ENST00000556907 EREGO14944 169 aa10.94□□□□□ -0.66
PCNX4-213ENST00000556907 VAMP8Q9BV40 100 aa10.94□□□□□ -0.66
PCNX4-213ENST00000556907 IGKV2D-24A0A075B6R9 120 aa10.93□□□□□ -0.66
PCNX4-213ENST00000556907 TNP2Q05952 138 aa10.93□□□□□ -0.66
PCNX4-213ENST00000556907 LINC00518Q8N0U6 118 aa10.93□□□□□ -0.66
PCNX4-213ENST00000556907 C12orf57Q99622 126 aa10.93□□□□□ -0.66
PCNX4-213ENST00000556907 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
PCNX4-213ENST00000556907 HSBP1L1C9JCN9 74 aa10.92□□□□□ -0.66
PCNX4-213ENST00000556907 COX6A2Q02221 97 aa10.92□□□□□ -0.66
PCNX4-213ENST00000556907 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
PCNX4-213ENST00000556907 LINC00469Q8N7U9 141 aa10.92□□□□□ -0.66
PCNX4-213ENST00000556907 IGHV3OR16-9A0A0B4J2B5 98 aa10.91□□□□□ -0.66
PCNX4-213ENST00000556907 TMEM223A0PJW6 202 aa10.91□□□□□ -0.66
PCNX4-213ENST00000556907 S100A12P80511 92 aa10.91□□□□□ -0.66
PCNX4-213ENST00000556907 CHCHD10Q8WYQ3 142 aaPredicted RBP10.91□□□□□ -0.66
PCNX4-213ENST00000556907 CDKN2A-AS1Q9UH64 79 aa10.91□□□□□ -0.66
PCNX4-213ENST00000556907 H3BRM9 83 aa10.9□□□□□ -0.66
PCNX4-213ENST00000556907 HERVK_113P61574 105 aa10.9□□□□□ -0.66
PCNX4-213ENST00000556907 MAJINQ3KP22 176 aa10.9□□□□□ -0.66
PCNX4-213ENST00000556907 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
PCNX4-213ENST00000556907 FAT2Q9NYQ8 4349 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 A0A087WTM6 91 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 A0A1B0GVY2 172 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 XCL1P47992 114 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 ANKRD39Q53RE8 183 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 LINC01561Q8N1V8 128 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 PAM16Q9Y3D7 125 aa10.89□□□□□ -0.67
PCNX4-213ENST00000556907 IGLV10-54A0A075B6I4 117 aa10.88□□□□□ -0.67
PCNX4-213ENST00000556907 A0A087WZ39 114 aa10.88□□□□□ -0.67
PCNX4-213ENST00000556907 E9PLD3 99 aa10.88□□□□□ -0.67
PCNX4-213ENST00000556907 FOXI1Q12951 378 aa10.88□□□□□ -0.67
PCNX4-213ENST00000556907 STPG4Q8N801 248 aa10.88□□□□□ -0.67
PCNX4-213ENST00000556907 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
PCNX4-213ENST00000556907 SMIM1B2RUZ4 78 aa10.87□□□□□ -0.67
PCNX4-213ENST00000556907 KRTAP26-1Q6PEX3 210 aa10.87□□□□□ -0.67
PCNX4-213ENST00000556907 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
PCNX4-213ENST00000556907 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
PCNX4-213ENST00000556907 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
PCNX4-213ENST00000556907 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
PCNX4-213ENST00000556907 COX7A2LO14548 114 aa10.85□□□□□ -0.67
PCNX4-213ENST00000556907 C14orf177Q52M58 125 aa10.85□□□□□ -0.67
PCNX4-213ENST00000556907 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
PCNX4-213ENST00000556907 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
PCNX4-213ENST00000556907 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
PCNX4-213ENST00000556907 LEPROTO15243 131 aa10.84□□□□□ -0.67
PCNX4-213ENST00000556907 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
PCNX4-213ENST00000556907 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
PCNX4-213ENST00000556907 Q8N814 137 aa10.83□□□□□ -0.68
PCNX4-213ENST00000556907 NTN5Q8WTR8 489 aaPredicted RBP10.83□□□□□ -0.68
PCNX4-213ENST00000556907 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
PCNX4-213ENST00000556907 CFAP161Q6P656 301 aa10.82□□□□□ -0.68
PCNX4-213ENST00000556907 IGHV3-64A0A075B6Q5 118 aa10.81□□□□□ -0.68
PCNX4-213ENST00000556907 NMUP48645 174 aa10.81□□□□□ -0.68
PCNX4-213ENST00000556907 PKD1P98161 4303 aa10.81□□□□□ -0.68
PCNX4-213ENST00000556907 J3QQQ9 107 aa10.8□□□□□ -0.68
PCNX4-213ENST00000556907 APOMO95445 188 aa10.8□□□□□ -0.68
PCNX4-213ENST00000556907 COX8AP10176 69 aa10.8□□□□□ -0.68
PCNX4-213ENST00000556907 MALP21145 153 aa10.79□□□□□ -0.68
PCNX4-213ENST00000556907 USP17L23D6RBM5 183 aa10.78□□□□□ -0.68
PCNX4-213ENST00000556907 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
PCNX4-213ENST00000556907 Q8IZM0 81 aa10.78□□□□□ -0.68
PCNX4-213ENST00000556907 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
PCNX4-213ENST00000556907 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
PCNX4-213ENST00000556907 HECTD4Q9Y4D8 3996 aa10.77□□□□□ -0.68
PCNX4-213ENST00000556907 DNAH11Q96DT5 4516 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 TSTD3H0UI37 97 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 DLEU1O43261 78 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 WFDC2Q14508 124 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms