RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	LAMTOR2	Q9Y2Q5	125 aa		5.76	□□□□□ -1.49
PRKCH-222	ENST00000556778	TRAPPC1	Q9Y5R8	145 aa		5.76	□□□□□ -1.49
PRKCH-222	ENST00000556778	COX11	Q9Y6N1	276 aa		5.76	□□□□□ -1.49
PRKCH-222	ENST00000556778	TRAV8-4	A0A0B4J246	113 aa		5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	CCL25	O15444	150 aa		5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	SCO1	O75880	301 aa		5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	ZNF25	P17030	456 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	HAMP	P81172	84 aa		5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	MAJIN	Q3KP22	176 aa		5.75	□□□□□ -1.49
PRKCH-222	ENST00000556778	TRAV13-1	A0A0B4J241	112 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	SLPI	P03973	132 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	GCSH	P23434	173 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	FOXI1	Q12951	378 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	PRSS3P2	Q8NHM4	247 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	URB1-AS1	Q96HZ7	61 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	KRTAP4-11	Q9BYQ6	195 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	KRTAP4-2	Q9BYR5	136 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	SMCO4	Q9NRQ5	59 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	FAM30A	Q9NZY2	134 aa		5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	CSDC2	Q9Y534	153 aa	Known RBP	5.74	□□□□□ -1.49
PRKCH-222	ENST00000556778	C2orf66	Q6UXQ4	117 aa		5.73	□□□□□ -1.49
PRKCH-222	ENST00000556778	C15orf56	Q8N910	161 aa		5.73	□□□□□ -1.49
PRKCH-222	ENST00000556778	LINC00526	Q96FQ7	95 aa		5.73	□□□□□ -1.49
PRKCH-222	ENST00000556778	TIMM21	Q9BVV7	248 aa		5.73	□□□□□ -1.49
PRKCH-222	ENST00000556778	IGLV4-3	A0A075B6K6	122 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	IGIP	A6NJ69	53 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	MT-ND6	P03923	174 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	PCP4	P48539	62 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	XG	P55808	180 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	COX19	Q49B96	90 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	HIGD2B	Q4VC39	106 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	C18orf32	Q8TCD1	76 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	TMEM18	Q96B42	140 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	NXT2	Q9NPJ8	142 aa	Known RBP	5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	SPANXA1	Q9NS26	97 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	FAT1	Q14517	4588 aa		5.72	□□□□□ -1.49
PRKCH-222	ENST00000556778	hDV102S1	A0JD36	115 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	LINC01546	A6NGU7	62 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	COLCA2	A8K830	154 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	MRPS36	P82909	103 aa	Known RBP	5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	COX6A2	Q02221	97 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	SS18	Q15532	418 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	PMCHL1	Q16048	86 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	ORMDL2	Q53FV1	153 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	C5orf38	Q86SI9	138 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778	CYSLTR1	Q9Y271	337 aa		5.71	□□□□□ -1.5
PRKCH-222	ENST00000556778		A0A096LNJ9	63 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	TRGC2	P03986	189 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	CD164L2	Q6UWJ8	174 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	LINC00173	Q6ZV60	143 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	TOMM6	Q96B49	74 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	KRTAP4-5	Q9BYR2	181 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	PYGO1	Q9Y3Y4	419 aa		5.7	□□□□□ -1.5
PRKCH-222	ENST00000556778	IFITM10	A6NMD0	228 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	C1orf196	B1AJZ1	125 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	PANO1	I0J062	215 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	LINC00242	Q5T6M2	205 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	FA2H	Q7L5A8	372 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	TMEM141	Q96I45	108 aa		5.69	□□□□□ -1.5
PRKCH-222	ENST00000556778	ABCA13	Q86UQ4	5058 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778		K7EMI3	77 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	SMR3B	P02814	79 aa	Predicted RBP	5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	LINC00614	P0C842	121 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	SMAGP	Q0VAQ4	97 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	SCGB3A1	Q96QR1	104 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	AMELX	Q99217	191 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	VCX2	Q9H322	139 aa		5.68	□□□□□ -1.5
PRKCH-222	ENST00000556778	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	COX7A2L	O14548	114 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	CDK2AP2	O75956	126 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	UBE2D1	P51668	147 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	C14orf177	Q52M58	125 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	TEX43	Q6ZNM6	134 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	SDIM1	Q6ZPB5	146 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	C9orf163	Q8N9P6	203 aa		5.67	□□□□□ -1.5
PRKCH-222	ENST00000556778	IGLV4-69	A0A075B6H9	119 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778		A0A0J9YXV3	536 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	NUPR1	O60356	82 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	MAL	P21145	153 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	CNBP	P62633	177 aa	Known RBP	5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	RNF151	Q2KHN1	245 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	ERAS	Q7Z444	233 aa		5.66	□□□□□ -1.5
PRKCH-222	ENST00000556778	IGHV1-58	A0A0C4DH39	117 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	CHTF8	P0CG12	524 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778		Q6ZN92	141 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778		Q6ZSA8	131 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	LINC00518	Q8N0U6	118 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	FAM19A2	Q8N3H0	131 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	TIMM17A	Q99595	171 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	CST9L	Q9H4G1	147 aa		5.65	□□□□□ -1.5
PRKCH-222	ENST00000556778	PCLO	Q9Y6V0	5065 aa		5.64	□□□□□ -1.51
PRKCH-222	ENST00000556778	IGHV3-64	A0A075B6Q5	118 aa		5.64	□□□□□ -1.51
PRKCH-222	ENST00000556778	PDZD11	Q5EBL8	140 aa		5.64	□□□□□ -1.51
PRKCH-222	ENST00000556778	SCX	Q7RTU7	201 aa		5.64	□□□□□ -1.51
PRKCH-222	ENST00000556778	CDKN2A-AS1	Q9UH64	79 aa		5.64	□□□□□ -1.51
PRKCH-222	ENST00000556778		A0A087WZ39	114 aa		5.63	□□□□□ -1.51
PRKCH-222	ENST00000556778		H0Y8G0	127 aa		5.63	□□□□□ -1.51
PRKCH-222	ENST00000556778	G0S2	P27469	103 aa		5.63	□□□□□ -1.51
PRKCH-222	ENST00000556778	NDUFA6	P56556	154 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms