RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 K7EMI3 77 aa7.39□□□□□ -1.23
SLIRP-205ENST00000556310 COX7A2LO14548 114 aa7.39□□□□□ -1.23
SLIRP-205ENST00000556310 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
SLIRP-205ENST00000556310 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-205ENST00000556310 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
SLIRP-205ENST00000556310 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
SLIRP-205ENST00000556310 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
SLIRP-205ENST00000556310 PYGO1Q9Y3Y4 419 aa7.39□□□□□ -1.23
SLIRP-205ENST00000556310 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 IFITM10A6NMD0 228 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 PANO1I0J062 215 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 MALP21145 153 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 KRTAP19-4Q3LI73 84 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 COX19Q49B96 90 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 GNB1LQ9BYB4 327 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 RPS10P5Q9NQ39 176 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
SLIRP-205ENST00000556310 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-205ENST00000556310 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
SLIRP-205ENST00000556310 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
SLIRP-205ENST00000556310 KIAA1644Q3SXP7 199 aa7.37□□□□□ -1.23
SLIRP-205ENST00000556310 C2orf66Q6UXQ4 117 aa7.37□□□□□ -1.23
SLIRP-205ENST00000556310 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-205ENST00000556310 MT-ND6P03923 174 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 NDUFA5Q16718 116 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 LINC00526Q96FQ7 95 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 CARD19Q96LW7 228 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 PKIGQ9Y2B9 76 aa7.36□□□□□ -1.23
SLIRP-205ENST00000556310 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 APOMO95445 188 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 NPSP0C0P6 89 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 COX6A2Q02221 97 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 C5orf38Q86SI9 138 aa7.35□□□□□ -1.23
SLIRP-205ENST00000556310 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-205ENST00000556310 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 APOC3P02656 99 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 G0S2P27469 103 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 Q6ZN92 141 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 TEX43Q6ZNM6 134 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 SVBPQ8N300 66 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
SLIRP-205ENST00000556310 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-205ENST00000556310 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 SNAPINO95295 136 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-205ENST00000556310 SPAG11BQ08648 103 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 ODF1Q14990 250 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 C2orf48Q96LS8 159 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 C2orf88Q9BSF0 95 aa7.33□□□□□ -1.24
SLIRP-205ENST00000556310 A0A087WYN8 130 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 A0A096LNI7 61 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 UBE2D1P51668 147 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 LINC00173Q6ZV60 143 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 CAMK2N2Q96S95 79 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 AMELXQ99217 191 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 PLAC8Q9NZF1 115 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
SLIRP-205ENST00000556310 A0A087WZ39 114 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 LINC01546A6NGU7 62 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 RPL37AP61513 92 aaKnown RBP7.31□□□□□ -1.24
SLIRP-205ENST00000556310 FABP9Q0Z7S8 132 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 PAPPA-AS1Q5QFB9 102 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 Q6ZRU5 148 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 TOMM6Q96B49 74 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 DPH3Q96FX2 82 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 VCX2Q9H322 139 aa7.31□□□□□ -1.24
SLIRP-205ENST00000556310 LINC01549A6NIU2 74 aa7.3□□□□□ -1.24
SLIRP-205ENST00000556310 F8WDY8 70 aa7.3□□□□□ -1.24
SLIRP-205ENST00000556310 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
SLIRP-205ENST00000556310 LOC107984640A0A0U1RRK4 108 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 FA2HQ7L5A8 372 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 ERASQ7Z444 233 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 FAM19A3Q7Z5A8 133 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 STPG4Q8N801 248 aa7.29□□□□□ -1.24
SLIRP-205ENST00000556310 NDUFA1O15239 70 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 SCGB3A1Q96QR1 104 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 SMCO4Q9NRQ5 59 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 MRPL35Q9NZE8 188 aaKnown RBP7.28□□□□□ -1.24
SLIRP-205ENST00000556310 TRAPPC1Q9Y5R8 145 aa7.28□□□□□ -1.24
SLIRP-205ENST00000556310 HERC1Q15751 4861 aa7.27□□□□□ -1.25
SLIRP-205ENST00000556310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-205ENST00000556310 SEC11AP67812 179 aa7.27□□□□□ -1.25
SLIRP-205ENST00000556310 C7orf33Q8WU49 177 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms