RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 UBE2D1P51668 147 aa9.31□□□□□ -0.92
SNX6-206ENST00000556162 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
SNX6-206ENST00000556162 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
SNX6-206ENST00000556162 DYNC1H1Q14204 4646 aaKnown RBP9.31□□□□□ -0.92
SNX6-206ENST00000556162 ATP5LO75964 103 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 COX7A2LO14548 114 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 LINC00310P59036 64 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 PMVKQ15126 192 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
SNX6-206ENST00000556162 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.29□□□□□ -0.92
SNX6-206ENST00000556162 MALP21145 153 aa9.29□□□□□ -0.92
SNX6-206ENST00000556162 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
SNX6-206ENST00000556162 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
SNX6-206ENST00000556162 IGHV3OR16-9A0A0B4J2B5 98 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 NUPR1O60356 82 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 AKR1D1P51857 326 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 SEC11AP67812 179 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 IGLV5-52A0A0A0MRZ9 124 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 PRSS1P07477 247 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX6-206ENST00000556162 NDUFA6P56556 154 aa9.28□□□□□ -0.92
SNX6-206ENST00000556162 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 hDV102S1A0JD36 115 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 S100A6P06703 90 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 COX6A2Q02221 97 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 C15orf56Q8N910 161 aa9.27□□□□□ -0.93
SNX6-206ENST00000556162 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
SNX6-206ENST00000556162 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
SNX6-206ENST00000556162 IFI27L1Q96BM0 104 aa9.26□□□□□ -0.93
SNX6-206ENST00000556162 GEMIN7Q9H840 131 aaKnown RBP9.26□□□□□ -0.93
SNX6-206ENST00000556162 LRP1BQ9NZR2 4599 aa9.26□□□□□ -0.93
SNX6-206ENST00000556162 APOMO95445 188 aa9.25□□□□□ -0.93
SNX6-206ENST00000556162 HERVK_113P63121 156 aa9.25□□□□□ -0.93
SNX6-206ENST00000556162 A0A0J9YXV3 536 aa9.25□□□□□ -0.93
SNX6-206ENST00000556162 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
SNX6-206ENST00000556162 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
SNX6-206ENST00000556162 A0A087WZ39 114 aa9.24□□□□□ -0.93
SNX6-206ENST00000556162 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
SNX6-206ENST00000556162 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
SNX6-206ENST00000556162 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
SNX6-206ENST00000556162 FABP4P15090 132 aa9.23□□□□□ -0.93
SNX6-206ENST00000556162 COA6Q5JTJ3 125 aaKnown RBP9.23□□□□□ -0.93
SNX6-206ENST00000556162 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
SNX6-206ENST00000556162 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
SNX6-206ENST00000556162 GCSHP23434 173 aa9.23□□□□□ -0.93
SNX6-206ENST00000556162 SNRPEP62304 92 aaKnown RBP9.22□□□□□ -0.93
SNX6-206ENST00000556162 C12orf57Q99622 126 aa9.22□□□□□ -0.93
SNX6-206ENST00000556162 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
SNX6-206ENST00000556162 IGHV3-64A0A075B6Q5 118 aa9.21□□□□□ -0.93
SNX6-206ENST00000556162 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.93
SNX6-206ENST00000556162 LINC01561Q8N1V8 128 aa9.21□□□□□ -0.93
SNX6-206ENST00000556162 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.93
SNX6-206ENST00000556162 TRAV12-1A0A0B4J245 112 aa9.21□□□□□ -0.94
SNX6-206ENST00000556162 SMIM6P0DI80 62 aa9.21□□□□□ -0.94
SNX6-206ENST00000556162 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.94
SNX6-206ENST00000556162 OR10D4PQ8NGN7 298 aa9.21□□□□□ -0.94
SNX6-206ENST00000556162 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
SNX6-206ENST00000556162 CHTOPQ9Y3Y2 248 aaKnown RBP9.21□□□□□ -0.94
SNX6-206ENST00000556162 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
SNX6-206ENST00000556162 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
SNX6-206ENST00000556162 PACRGQ96M98 296 aaPredicted RBP9.2□□□□□ -0.94
SNX6-206ENST00000556162 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 SLPIP03973 132 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 S100A12P80511 92 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 SPAG11BQ08648 103 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 H0Y8G0 127 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
SNX6-206ENST00000556162 H3BRM9 83 aa9.18□□□□□ -0.94
SNX6-206ENST00000556162 LINC01620Q4KN68 170 aa9.18□□□□□ -0.94
SNX6-206ENST00000556162 MAP1LC3CQ9BXW4 147 aa9.18□□□□□ -0.94
SNX6-206ENST00000556162 PCP4L1A6NKN8 68 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 F8VRH5 84 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
SNX6-206ENST00000556162 MRPL35Q9NZE8 188 aaKnown RBP9.17□□□□□ -0.94
SNX6-206ENST00000556162 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
SNX6-206ENST00000556162 PRSS2P07478 247 aa9.16□□□□□ -0.94
SNX6-206ENST00000556162 F8WDY8 70 aa9.15□□□□□ -0.94
SNX6-206ENST00000556162 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.94
SNX6-206ENST00000556162 ODF1Q14990 250 aa9.15□□□□□ -0.94
SNX6-206ENST00000556162 TMEM170BQ5T4T1 132 aa9.15□□□□□ -0.94
SNX6-206ENST00000556162 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
SNX6-206ENST00000556162 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
SNX6-206ENST00000556162 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.95
SNX6-206ENST00000556162 SPINK8P0C7L1 97 aa9.15□□□□□ -0.95
SNX6-206ENST00000556162 KIAA0087Q14695 138 aa9.15□□□□□ -0.95
SNX6-206ENST00000556162 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.95
SNX6-206ENST00000556162 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.95
SNX6-206ENST00000556162 Q8IZM0 81 aa9.14□□□□□ -0.95
SNX6-206ENST00000556162 NDUFA1O15239 70 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms