RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PYGO1Q9Y3Y4 419 aa8.68□□□□□ -1.02
SNX6-203ENST00000555416 A0A087WYN8 130 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 IGHV3OR16-9A0A0B4J2B5 98 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 IFITM10A6NMD0 228 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 MALP21145 153 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 S100PP25815 95 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 RHEBQ15382 184 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 GNB1LQ9BYB4 327 aa8.67□□□□□ -1.02
SNX6-203ENST00000555416 A0A096LNI7 61 aa8.66□□□□□ -1.02
SNX6-203ENST00000555416 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
SNX6-203ENST00000555416 Q6ZRU5 148 aa8.66□□□□□ -1.02
SNX6-203ENST00000555416 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
SNX6-203ENST00000555416 ALKBH7Q9BT30 221 aaPredicted RBP8.66□□□□□ -1.02
SNX6-203ENST00000555416 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
SNX6-203ENST00000555416 TGIF2-C20orf24A0A0A6YYL0 155 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 APOC3P02656 99 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
SNX6-203ENST00000555416 NXT2Q9NPJ8 142 aaKnown RBP8.65□□□□□ -1.02
SNX6-203ENST00000555416 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
SNX6-203ENST00000555416 MAJINQ3KP22 176 aa8.64□□□□□ -1.03
SNX6-203ENST00000555416 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
SNX6-203ENST00000555416 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
SNX6-203ENST00000555416 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
SNX6-203ENST00000555416 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
SNX6-203ENST00000555416 UBE2D1P51668 147 aa8.63□□□□□ -1.03
SNX6-203ENST00000555416 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
SNX6-203ENST00000555416 AMELXQ99217 191 aa8.63□□□□□ -1.03
SNX6-203ENST00000555416 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
SNX6-203ENST00000555416 K7EMI3 77 aa8.62□□□□□ -1.03
SNX6-203ENST00000555416 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
SNX6-203ENST00000555416 FABP9Q0Z7S8 132 aa8.62□□□□□ -1.03
SNX6-203ENST00000555416 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
SNX6-203ENST00000555416 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
SNX6-203ENST00000555416 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
SNX6-203ENST00000555416 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
SNX6-203ENST00000555416 HERC1Q15751 4861 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 A0A087WZ39 114 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 APOMO95445 188 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 MT-ND6P03923 174 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 STPG4Q8N801 248 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 OR10D4PQ8NGN7 298 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 YPEL4Q96NS1 127 aa8.6□□□□□ -1.03
SNX6-203ENST00000555416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.59□□□□□ -1.03
SNX6-203ENST00000555416 COX19Q49B96 90 aa8.59□□□□□ -1.03
SNX6-203ENST00000555416 SVBPQ8N300 66 aa8.59□□□□□ -1.03
SNX6-203ENST00000555416 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
SNX6-203ENST00000555416 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SNX6-203ENST00000555416 SNAPINO95295 136 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 GAGE2BQ13066 116 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 UNQ6190/PRO20217Q6UXQ8 127 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 Q6ZN92 141 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
SNX6-203ENST00000555416 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
SNX6-203ENST00000555416 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 NPSP0C0P6 89 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 SCGB3A1Q96QR1 104 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 C2orf88Q9BSF0 95 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 TRAPPC1Q9Y5R8 145 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
SNX6-203ENST00000555416 A0A096LNJ9 63 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 ERASQ7Z444 233 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 SLC7A5P1Q8MH63 180 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
SNX6-203ENST00000555416 FA2HQ7L5A8 372 aa8.55□□□□□ -1.04
SNX6-203ENST00000555416 MRPL35Q9NZE8 188 aaKnown RBP8.55□□□□□ -1.04
SNX6-203ENST00000555416 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
SNX6-203ENST00000555416 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
SNX6-203ENST00000555416 NDUFA1O15239 70 aa8.54□□□□□ -1.04
SNX6-203ENST00000555416 G0S2P27469 103 aa8.54□□□□□ -1.04
SNX6-203ENST00000555416 RPL18AQ02543 176 aaKnown RBP8.54□□□□□ -1.04
SNX6-203ENST00000555416 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
SNX6-203ENST00000555416 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
SNX6-203ENST00000555416 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
SNX6-203ENST00000555416 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
SNX6-203ENST00000555416 Q6ZRP5 223 aa8.53□□□□□ -1.04
SNX6-203ENST00000555416 F8WDY8 70 aa8.52□□□□□ -1.05
SNX6-203ENST00000555416 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
SNX6-203ENST00000555416 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
SNX6-203ENST00000555416 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
SNX6-203ENST00000555416 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
SNX6-203ENST00000555416 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
SNX6-203ENST00000555416 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms