RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 UBE2WQ96B02 151 aa16.9■□□□□ 0.3
STRN3-207ENST00000555358 CLUHP3Q96NS8 147 aa16.9■□□□□ 0.3
STRN3-207ENST00000555358 C2orf82Q6UX34 121 aa16.9■□□□□ 0.3
STRN3-207ENST00000555358 LST1O00453 97 aa16.89■□□□□ 0.29
STRN3-207ENST00000555358 IGLV5-39A0A0G2JS06 123 aa16.88■□□□□ 0.29
STRN3-207ENST00000555358 H3BT86 120 aa16.88■□□□□ 0.29
STRN3-207ENST00000555358 LINC00242Q5T6M2 205 aa16.88■□□□□ 0.29
STRN3-207ENST00000555358 DGAT2L7PQ6IED9 249 aa16.88■□□□□ 0.29
STRN3-207ENST00000555358 IL17DQ8TAD2 202 aa16.87■□□□□ 0.29
STRN3-207ENST00000555358 TRAV8-4A0A0B4J246 113 aa16.86■□□□□ 0.29
STRN3-207ENST00000555358 CMC4P56277 68 aaPredicted RBP16.86■□□□□ 0.29
STRN3-207ENST00000555358 LINC00694P0DN24 101 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 HERVK_113P63121 156 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 FAM19A3Q7Z5A8 133 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 FAM110AQ9BQ89 295 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 TRAV4A0A0B4J268 109 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 C1orf158Q8N1D5 194 aa16.85■□□□□ 0.29
STRN3-207ENST00000555358 RPL35AP18077 110 aaKnown RBP16.84■□□□□ 0.29
STRN3-207ENST00000555358 KRTAP24-1Q3LI83 254 aa16.84■□□□□ 0.29
STRN3-207ENST00000555358 Q9H8V8 135 aa16.84■□□□□ 0.29
STRN3-207ENST00000555358 SNCGO76070 127 aa16.84■□□□□ 0.29
STRN3-207ENST00000555358 LINC00308Q8TCZ7 52 aa16.84■□□□□ 0.29
STRN3-207ENST00000555358 GIG44P09565 113 aaPredicted RBP16.83■□□□□ 0.28
STRN3-207ENST00000555358 CIRBPQ14011 172 aaKnown RBP16.83■□□□□ 0.28
STRN3-207ENST00000555358 ANAPC13Q9BS18 74 aa16.83■□□□□ 0.28
STRN3-207ENST00000555358 FBN1P35555 2871 aaKnown RBP16.82■□□□□ 0.28
STRN3-207ENST00000555358 TRGV1A0A0A0MS02 117 aa16.81■□□□□ 0.28
STRN3-207ENST00000555358 SMIM1B2RUZ4 78 aa16.81■□□□□ 0.28
STRN3-207ENST00000555358 C9orf66Q5T8R8 295 aa16.81■□□□□ 0.28
STRN3-207ENST00000555358 NTM-AS1Q6ZSK4 140 aa16.81■□□□□ 0.28
STRN3-207ENST00000555358 CSDC2Q9Y534 153 aaKnown RBP16.81■□□□□ 0.28
STRN3-207ENST00000555358 GAGE2BQ13066 116 aa16.8■□□□□ 0.28
STRN3-207ENST00000555358 GAGE2EQ4V326 116 aa16.8■□□□□ 0.28
STRN3-207ENST00000555358 GAGE2DQ9UEU5 116 aa16.8■□□□□ 0.28
STRN3-207ENST00000555358 DEFB121Q5J5C9 76 aa16.8■□□□□ 0.28
STRN3-207ENST00000555358 NHLRC4P0CG21 123 aaPredicted RBP16.79■□□□□ 0.28
STRN3-207ENST00000555358 ZNF625Q96I27 306 aaPredicted RBP16.79■□□□□ 0.28
STRN3-207ENST00000555358 K7EQD1 137 aa16.78■□□□□ 0.28
STRN3-207ENST00000555358 SOSTDC1Q6X4U4 206 aa16.78■□□□□ 0.28
STRN3-207ENST00000555358 TRBV10-1A0A0K0K1A3 114 aa16.78■□□□□ 0.28
STRN3-207ENST00000555358 RPL36AP83881 106 aaKnown RBP16.77■□□□□ 0.28
STRN3-207ENST00000555358 C15orf53Q8NAA6 179 aa16.77■□□□□ 0.28
STRN3-207ENST00000555358 RPL36ALQ969Q0 106 aaKnown RBP16.77■□□□□ 0.28
STRN3-207ENST00000555358 Q6Q795 121 aa16.77■□□□□ 0.27
STRN3-207ENST00000555358 Q6ZTI0 123 aa16.77■□□□□ 0.27
STRN3-207ENST00000555358 TRAV13-1A0A0B4J241 112 aa16.76■□□□□ 0.27
STRN3-207ENST00000555358 A0A0U1RRA0 63 aa16.76■□□□□ 0.27
STRN3-207ENST00000555358 DAZ2Q13117 558 aaKnown RBP16.76■□□□□ 0.27
STRN3-207ENST00000555358 DAZ4Q86SG3 579 aaKnown RBP16.76■□□□□ 0.27
STRN3-207ENST00000555358 DAZ3Q9NR90 486 aaKnown RBP16.76■□□□□ 0.27
STRN3-207ENST00000555358 F5H768 121 aa16.76■□□□□ 0.27
STRN3-207ENST00000555358 STAB1Q9NY15 2570 aa16.75■□□□□ 0.27
STRN3-207ENST00000555358 PRIMA1Q86XR5 153 aa16.75■□□□□ 0.27
STRN3-207ENST00000555358 CDC42SE2Q9NRR3 84 aa16.75■□□□□ 0.27
STRN3-207ENST00000555358 NDUFV3P56181 108 aaKnown RBP16.74■□□□□ 0.27
STRN3-207ENST00000555358 MAST4O15021 2626 aa16.74■□□□□ 0.27
STRN3-207ENST00000555358 FAM240AA0A1B0GVK7 77 aa16.74■□□□□ 0.27
STRN3-207ENST00000555358 SHISA2Q6UWI4 295 aa16.73■□□□□ 0.27
STRN3-207ENST00000555358 COX7A2LO14548 114 aa16.73■□□□□ 0.27
STRN3-207ENST00000555358 CSNK1G2-AS1Q8NCQ2 148 aa16.72■□□□□ 0.27
STRN3-207ENST00000555358 GAGE12JA6NER3 117 aa16.72■□□□□ 0.27
STRN3-207ENST00000555358 GAGE4Q13068 117 aa16.72■□□□□ 0.27
STRN3-207ENST00000555358 GAGE5Q13069 117 aa16.72■□□□□ 0.27
STRN3-207ENST00000555358 WFDC9Q8NEX5 89 aa16.72■□□□□ 0.27
STRN3-207ENST00000555358 MRPL23Q16540 153 aaKnown RBP16.71■□□□□ 0.27
STRN3-207ENST00000555358 COPS9Q8WXC6 57 aa16.71■□□□□ 0.27
STRN3-207ENST00000555358 TTC32Q5I0X7 151 aa16.69■□□□□ 0.26
STRN3-207ENST00000555358 MEIG1Q5JSS6 88 aa16.69■□□□□ 0.26
STRN3-207ENST00000555358 HERV-K104P63124 156 aa16.68■□□□□ 0.26
STRN3-207ENST00000555358 GAGE6Q13070 117 aa16.66■□□□□ 0.26
STRN3-207ENST00000555358 PPDPFQ9H3Y8 114 aa16.66■□□□□ 0.26
STRN3-207ENST00000555358 NOP10Q9NPE3 64 aaKnown RBP16.66■□□□□ 0.26
STRN3-207ENST00000555358 C3orf56Q8N813 242 aa16.65■□□□□ 0.26
STRN3-207ENST00000555358 TMEM243Q9BU79 118 aa16.65■□□□□ 0.26
STRN3-207ENST00000555358 PLAC8L1A1L4L8 177 aa16.64■□□□□ 0.25
STRN3-207ENST00000555358 CMYA5Q8N3K9 4069 aa16.64■□□□□ 0.25
STRN3-207ENST00000555358 UBE2L6O14933 153 aa16.62■□□□□ 0.25
STRN3-207ENST00000555358 NBEAL2Q6ZNJ1 2754 aa16.62■□□□□ 0.25
STRN3-207ENST00000555358 COL6A5A8TX70 2615 aa16.61■□□□□ 0.25
STRN3-207ENST00000555358 TRACP01848 142 aa16.61■□□□□ 0.25
STRN3-207ENST00000555358 LOC100131303A0A0U1RQF7 123 aa16.61■□□□□ 0.25
STRN3-207ENST00000555358 WIPF1O43516 503 aa16.6■□□□□ 0.25
STRN3-207ENST00000555358 C16orf74Q96GX8 76 aa16.6■□□□□ 0.25
STRN3-207ENST00000555358 FAM218AQ96MZ4 157 aa16.6■□□□□ 0.25
STRN3-207ENST00000555358 PKD1L1Q8TDX9 2849 aa16.59■□□□□ 0.25
STRN3-207ENST00000555358 OXLD1Q5BKU9 147 aa16.59■□□□□ 0.25
STRN3-207ENST00000555358 B5MCH6 92 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 GAGE7O76087 117 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 GAGE12FP0CL80 117 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 GAGE12GP0CL81 117 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 GAGE12IP0CL82 117 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 C22orf24Q9Y442 160 aa16.58■□□□□ 0.25
STRN3-207ENST00000555358 TRBV7-7A0A0K0K1E9 115 aa16.58■□□□□ 0.24
STRN3-207ENST00000555358 CCDC179H3BU77 68 aa16.58■□□□□ 0.24
STRN3-207ENST00000555358 TRBV6-4A0A1B0GX49 114 aa16.57■□□□□ 0.24
STRN3-207ENST00000555358 COX7B2Q8TF08 81 aa16.57■□□□□ 0.24
STRN3-207ENST00000555358 TRGV2A0A075B6R0 118 aa16.56■□□□□ 0.24
STRN3-207ENST00000555358 ACYP1P07311 99 aa16.56■□□□□ 0.24
STRN3-207ENST00000555358 SS18L2Q9UHA2 77 aa16.56■□□□□ 0.24
STRN3-207ENST00000555358 FAM222AQ5U5X8 452 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms