RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FAM104AQ969W3 186 aa7.82□□□□□ -1.16
XRCC3-212ENST00000555231 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
XRCC3-212ENST00000555231 SMDT1Q9H4I9 107 aa7.82□□□□□ -1.16
XRCC3-212ENST00000555231 F8WDY8 70 aa7.81□□□□□ -1.16
XRCC3-212ENST00000555231 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
XRCC3-212ENST00000555231 RIGQ13278 110 aa7.81□□□□□ -1.16
XRCC3-212ENST00000555231 TMEM241Q24JQ0 296 aa7.81□□□□□ -1.16
XRCC3-212ENST00000555231 SLC51BQ86UW2 128 aa7.81□□□□□ -1.16
XRCC3-212ENST00000555231 PPP1R2P9O14990 202 aa7.8□□□□□ -1.16
XRCC3-212ENST00000555231 PPP1R17O96001 155 aa7.8□□□□□ -1.16
XRCC3-212ENST00000555231 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
XRCC3-212ENST00000555231 LINC01551Q86U37 167 aa7.8□□□□□ -1.16
XRCC3-212ENST00000555231 SMIM7Q9BQ49 75 aa7.79□□□□□ -1.16
XRCC3-212ENST00000555231 OSTCQ9NRP0 149 aa7.79□□□□□ -1.16
XRCC3-212ENST00000555231 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
XRCC3-212ENST00000555231 KIAA0087Q14695 138 aa7.78□□□□□ -1.16
XRCC3-212ENST00000555231 C9orf129Q5T035 196 aaKnown RBP7.78□□□□□ -1.16
XRCC3-212ENST00000555231 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
XRCC3-212ENST00000555231 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
XRCC3-212ENST00000555231 V9GYV3 84 aa7.78□□□□□ -1.16
XRCC3-212ENST00000555231 HBBP68871 147 aa7.77□□□□□ -1.17
XRCC3-212ENST00000555231 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
XRCC3-212ENST00000555231 CARHSP1Q9Y2V2 147 aaKnown RBP7.77□□□□□ -1.17
XRCC3-212ENST00000555231 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
XRCC3-212ENST00000555231 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
XRCC3-212ENST00000555231 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
XRCC3-212ENST00000555231 ZNF861PO60384 105 aa7.76□□□□□ -1.17
XRCC3-212ENST00000555231 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
XRCC3-212ENST00000555231 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
XRCC3-212ENST00000555231 TGIF2-C20orf24A0A0A6YYL0 155 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 TCAPO15273 167 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 CKS2P33552 79 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
XRCC3-212ENST00000555231 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 SMIM2Q9BVW6 85 aa7.75□□□□□ -1.17
XRCC3-212ENST00000555231 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
XRCC3-212ENST00000555231 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
XRCC3-212ENST00000555231 TRBV30A0A0K0K1B3 111 aa7.74□□□□□ -1.17
XRCC3-212ENST00000555231 LINC00862A6NCI5 91 aa7.74□□□□□ -1.17
XRCC3-212ENST00000555231 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
XRCC3-212ENST00000555231 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
XRCC3-212ENST00000555231 NAT8BQ9UHF3 227 aa7.74□□□□□ -1.17
XRCC3-212ENST00000555231 A0A087X002 238 aa7.73□□□□□ -1.17
XRCC3-212ENST00000555231 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
XRCC3-212ENST00000555231 TCTE3Q8IZS6 198 aa7.73□□□□□ -1.17
XRCC3-212ENST00000555231 LINC00469Q8N7U9 141 aa7.73□□□□□ -1.17
XRCC3-212ENST00000555231 D6R8Y8 96 aa7.72□□□□□ -1.17
XRCC3-212ENST00000555231 NPYP01303 97 aa7.72□□□□□ -1.17
XRCC3-212ENST00000555231 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
XRCC3-212ENST00000555231 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
XRCC3-212ENST00000555231 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
XRCC3-212ENST00000555231 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
XRCC3-212ENST00000555231 NUPR1O60356 82 aa7.71□□□□□ -1.18
XRCC3-212ENST00000555231 IGLV4-3A0A075B6K6 122 aa7.7□□□□□ -1.18
XRCC3-212ENST00000555231 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
XRCC3-212ENST00000555231 RPL23P62829 140 aaKnown RBP7.7□□□□□ -1.18
XRCC3-212ENST00000555231 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
XRCC3-212ENST00000555231 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
XRCC3-212ENST00000555231 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
XRCC3-212ENST00000555231 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
XRCC3-212ENST00000555231 SMIM27A0A1W2PRY6 76 aa7.69□□□□□ -1.18
XRCC3-212ENST00000555231 ADIRFQ15847 76 aa7.69□□□□□ -1.18
XRCC3-212ENST00000555231 ZC2HC1BQ5TFG8 222 aa7.69□□□□□ -1.18
XRCC3-212ENST00000555231 MRPL54Q6P161 138 aaKnown RBP7.69□□□□□ -1.18
XRCC3-212ENST00000555231 CRYGAP11844 174 aa7.68□□□□□ -1.18
XRCC3-212ENST00000555231 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
XRCC3-212ENST00000555231 PRSS2P07478 247 aa7.67□□□□□ -1.18
XRCC3-212ENST00000555231 RAB5AP20339 215 aa7.67□□□□□ -1.18
XRCC3-212ENST00000555231 LBHQ53QV2 105 aaPredicted RBP7.67□□□□□ -1.18
XRCC3-212ENST00000555231 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
XRCC3-212ENST00000555231 PYGO1Q9Y3Y4 419 aa7.67□□□□□ -1.18
XRCC3-212ENST00000555231 A0A1B0GW15 77 aa7.66□□□□□ -1.18
XRCC3-212ENST00000555231 RPL28P46779 137 aaKnown RBP7.66□□□□□ -1.18
XRCC3-212ENST00000555231 CKS1BP61024 79 aa7.66□□□□□ -1.18
XRCC3-212ENST00000555231 TEX43Q6ZNM6 134 aa7.66□□□□□ -1.18
XRCC3-212ENST00000555231 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
XRCC3-212ENST00000555231 BCE1O60756 84 aa7.65□□□□□ -1.18
XRCC3-212ENST00000555231 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
XRCC3-212ENST00000555231 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
XRCC3-212ENST00000555231 Q6ZN92 141 aa7.65□□□□□ -1.18
XRCC3-212ENST00000555231 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
XRCC3-212ENST00000555231 LOC389332A0A1B0GUA5 103 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 A0A1B0GXF2 115 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 RPL37AP8A6NKH3 93 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 F8W036 122 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 LINC00173Q6ZV60 143 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 PRELID3AQ96N28 172 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 C2orf88Q9BSF0 95 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 ALKBH7Q9BT30 221 aaPredicted RBP7.64□□□□□ -1.19
XRCC3-212ENST00000555231 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
XRCC3-212ENST00000555231 PPBPP02775 128 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 S100A8P05109 93 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 TMEM136Q6ZRR5 245 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 ORMDL3Q8N138 153 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 LINC00167Q96N53 147 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
XRCC3-212ENST00000555231 C9JQL5 133 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms