RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LINC00269Q8N2A0 174 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 C1orf43Q9BWL3 253 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 HYDINQ4G0P3 5121 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 IGKV2D-24A0A075B6R9 120 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 A0A0J9YXV3 536 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 EREGO14944 169 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 DPM2O94777 84 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 UBE2D1P51668 147 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 REG3AQ06141 175 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 CLPSL2Q6UWE3 100 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 STPG4Q8N801 248 aa7.31□□□□□ -1.24
SHMT2-218ENST00000555213 C20orf202A1L168 122 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 IGKCP01834 107 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 IGLC3P0DOY3 106 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 COX6A2Q02221 97 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-218ENST00000555213 PRR34Q9NV39 138 aa7.3□□□□□ -1.24
SHMT2-218ENST00000555213 TRAV8-4A0A0B4J246 113 aa7.29□□□□□ -1.24
SHMT2-218ENST00000555213 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
SHMT2-218ENST00000555213 LINC00242Q5T6M2 205 aa7.29□□□□□ -1.24
SHMT2-218ENST00000555213 ENHOQ6UWT2 76 aa7.29□□□□□ -1.24
SHMT2-218ENST00000555213 PAM16Q9Y3D7 125 aa7.29□□□□□ -1.24
SHMT2-218ENST00000555213 DNAH6Q9C0G6 4158 aa7.28□□□□□ -1.24
SHMT2-218ENST00000555213 IGKV3OR2-268A0A0C4DH90 116 aa7.28□□□□□ -1.24
SHMT2-218ENST00000555213 TNP2Q05952 138 aa7.28□□□□□ -1.24
SHMT2-218ENST00000555213 PRO1933Q9H354 126 aa7.28□□□□□ -1.24
SHMT2-218ENST00000555213 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
SHMT2-218ENST00000555213 PLNP26678 52 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 SPATA45Q537H7 98 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 VAMP8Q9BV40 100 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 KMT2AQ03164 3969 aa7.27□□□□□ -1.25
SHMT2-218ENST00000555213 IGLV10-54A0A075B6I4 117 aa7.26□□□□□ -1.25
SHMT2-218ENST00000555213 IGLV5-45A0A087WSX0 123 aa7.26□□□□□ -1.25
SHMT2-218ENST00000555213 LINC00959A0A1B0GUT2 108 aa7.26□□□□□ -1.25
SHMT2-218ENST00000555213 S100A12P80511 92 aa7.26□□□□□ -1.25
SHMT2-218ENST00000555213 A0A087WTM6 91 aa7.25□□□□□ -1.25
SHMT2-218ENST00000555213 TRAV13-1A0A0B4J241 112 aa7.25□□□□□ -1.25
SHMT2-218ENST00000555213 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
SHMT2-218ENST00000555213 SS18Q15532 418 aa7.25□□□□□ -1.25
SHMT2-218ENST00000555213 CDKN2A-AS1Q9UH64 79 aa7.25□□□□□ -1.25
SHMT2-218ENST00000555213 CCL25O15444 150 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 MAPKAPK5-AS1Q8N8E1 139 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 C14orf144Q96I85 54 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 CHAC1Q9BUX1 264 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SHMT2-218ENST00000555213 IGHV3OR16-9A0A0B4J2B5 98 aa7.23□□□□□ -1.25
SHMT2-218ENST00000555213 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
SHMT2-218ENST00000555213 CHCHD10Q8WYQ3 142 aaPredicted RBP7.23□□□□□ -1.25
SHMT2-218ENST00000555213 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
SHMT2-218ENST00000555213 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
SHMT2-218ENST00000555213 HERC2O95714 4834 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 E9PLD3 99 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 COX8AP10176 69 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 XCL1P47992 114 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 KRTAP26-1Q6PEX3 210 aa7.22□□□□□ -1.25
SHMT2-218ENST00000555213 LRCOL1A6NCL2 159 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 LECT2O14960 151 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 HERVK_113P63121 156 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 Q8N814 137 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 NTN5Q8WTR8 489 aaPredicted RBP7.21□□□□□ -1.26
SHMT2-218ENST00000555213 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.26
SHMT2-218ENST00000555213 IGLV5-39A0A0G2JS06 123 aa7.2□□□□□ -1.26
SHMT2-218ENST00000555213 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
SHMT2-218ENST00000555213 SEC11AP67812 179 aa7.2□□□□□ -1.26
SHMT2-218ENST00000555213 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
SHMT2-218ENST00000555213 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
SHMT2-218ENST00000555213 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
SHMT2-218ENST00000555213 IGHV1-58A0A0C4DH39 117 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 LEPROTO15243 131 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 DLEU1O43261 78 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 SPINK8P0C7L1 97 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
SHMT2-218ENST00000555213 A0A087WZ39 114 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 IGLV5-52A0A0A0MRZ9 124 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 PCP4L1A6NKN8 68 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 C16orf90A8MZG2 172 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 SMIM1B2RUZ4 78 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 COX7A2LO14548 114 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 MALP21145 153 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 NMUP48645 174 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 FOXI1Q12951 378 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 WFDC2Q14508 124 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 C2orf91Q6ZV80 131 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 C5orf38Q86SI9 138 aa7.18□□□□□ -1.26
SHMT2-218ENST00000555213 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms