RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 RBMY1A1P0DJD3 496 aaKnown RBP7.13□□□□□ -1.27
PRKCH-211ENST00000555082 RBMY1CP0DJD4 496 aa7.13□□□□□ -1.27
PRKCH-211ENST00000555082 RBMY1FQ15415 496 aaKnown RBP7.13□□□□□ -1.27
PRKCH-211ENST00000555082 Q6ZSN1 163 aa7.13□□□□□ -1.27
PRKCH-211ENST00000555082 Q6Q795 121 aa7.12□□□□□ -1.27
PRKCH-211ENST00000555082 VSIG2Q96IQ7 327 aa7.12□□□□□ -1.27
PRKCH-211ENST00000555082 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
PRKCH-211ENST00000555082 LST1O00453 97 aa7.12□□□□□ -1.27
PRKCH-211ENST00000555082 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
PRKCH-211ENST00000555082 TRAV25A0A0B4J276 109 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
PRKCH-211ENST00000555082 PKD1L1Q8TDX9 2849 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 H3BT86 120 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 CDKN2A-AS1Q9UH64 79 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 SPANXDQ9BXN6 97 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
PRKCH-211ENST00000555082 LINC00467Q9BRT7 94 aa7.1□□□□□ -1.27
PRKCH-211ENST00000555082 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
PRKCH-211ENST00000555082 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
PRKCH-211ENST00000555082 STHQ8IWL8 128 aa7.09□□□□□ -1.27
PRKCH-211ENST00000555082 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.27
PRKCH-211ENST00000555082 COX6A2Q02221 97 aa7.09□□□□□ -1.27
PRKCH-211ENST00000555082 FAM110AQ9BQ89 295 aa7.09□□□□□ -1.27
PRKCH-211ENST00000555082 CHCHD7Q9BUK0 85 aa7.09□□□□□ -1.27
PRKCH-211ENST00000555082 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 C9orf66Q5T8R8 295 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 UBE2D4Q9Y2X8 147 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
PRKCH-211ENST00000555082 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 MDFIQ99750 246 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 Q9H8V8 135 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 LINC01587Q99440 93 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 RS1O15537 224 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 DGAT2L7PQ6IED9 249 aa7.07□□□□□ -1.28
PRKCH-211ENST00000555082 GIG44P09565 113 aaPredicted RBP7.06□□□□□ -1.28
PRKCH-211ENST00000555082 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
PRKCH-211ENST00000555082 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
PRKCH-211ENST00000555082 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
PRKCH-211ENST00000555082 A8MTW9 85 aa7.06□□□□□ -1.28
PRKCH-211ENST00000555082 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
PRKCH-211ENST00000555082 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
PRKCH-211ENST00000555082 KLK5Q9Y337 293 aaPredicted RBP7.05□□□□□ -1.28
PRKCH-211ENST00000555082 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
PRKCH-211ENST00000555082 DAZ2Q13117 558 aaKnown RBP7.05□□□□□ -1.28
PRKCH-211ENST00000555082 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
PRKCH-211ENST00000555082 DAZ4Q86SG3 579 aaKnown RBP7.05□□□□□ -1.28
PRKCH-211ENST00000555082 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
PRKCH-211ENST00000555082 Q9HAA7 133 aa7.05□□□□□ -1.28
PRKCH-211ENST00000555082 DAZ3Q9NR90 486 aaKnown RBP7.05□□□□□ -1.28
PRKCH-211ENST00000555082 TRBV7-7A0A0K0K1E9 115 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
PRKCH-211ENST00000555082 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 NDUFA1O15239 70 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 PIK3CD-AS1Q5SR53 167 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 C9orf153Q5TBE3 101 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 FAM218AQ96MZ4 157 aa7.04□□□□□ -1.28
PRKCH-211ENST00000555082 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 COX7A2LO14548 114 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 INSP01308 110 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
PRKCH-211ENST00000555082 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-211ENST00000555082 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
PRKCH-211ENST00000555082 LOC107984640A0A0U1RRK4 108 aa7.02□□□□□ -1.29
PRKCH-211ENST00000555082 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
PRKCH-211ENST00000555082 TIRAPP58753 221 aa7.01□□□□□ -1.29
PRKCH-211ENST00000555082 TIMM17BO60830 172 aa7.01□□□□□ -1.29
PRKCH-211ENST00000555082 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
PRKCH-211ENST00000555082 CMC4P56277 68 aaPredicted RBP7□□□□□ -1.29
PRKCH-211ENST00000555082 C22orf24Q9Y442 160 aa7□□□□□ -1.29
PRKCH-211ENST00000555082 IGKV3OR2-268A0A0C4DH90 116 aa7□□□□□ -1.29
PRKCH-211ENST00000555082 ZNF415Q09FC8 603 aa7□□□□□ -1.29
PRKCH-211ENST00000555082 LINC00643Q86TS7 51 aa7□□□□□ -1.29
PRKCH-211ENST00000555082 NBEAL1Q6ZS30 2694 aa7□□□□□ -1.29
PRKCH-211ENST00000555082 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
PRKCH-211ENST00000555082 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
PRKCH-211ENST00000555082 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
PRKCH-211ENST00000555082 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
PRKCH-211ENST00000555082 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
PRKCH-211ENST00000555082 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
PRKCH-211ENST00000555082 ANK2Q01484 3957 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 IGHV4-30-4P0DP06 118 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 HERVK_113P63121 156 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 ACYP1P07311 99 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 DEFB135Q30KP9 77 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
PRKCH-211ENST00000555082 EDA2RQ9HAV5 297 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms