RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 RSPO1Q2MKA7 263 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-216ENST00000555002 C1orf137Q5JT78 98 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 Q8N976 141 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 ZNF524Q96C55 264 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 C10orf91Q5T1B1 145 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 SBSPONQ8IVN8 264 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 Q6ZQY7 126 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 TRBV6-8A0A0A6YYG3 113 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 H7C423 109 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 C1orf195Q5TG92 126 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 RNASE8Q8TDE3 154 aaKnown RBP5.14□□□□□ -1.59
SYNE2-216ENST00000555002 TRIAP1O43715 76 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 IBA57-AS1B1ANH7 110 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 Q6YL49 198 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 CHD8Q9HCK8 2581 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 CRYGAP11844 174 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 UQCRQO14949 82 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
SYNE2-216ENST00000555002 PRLHP81277 87 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 ANKRD11Q6UB99 2663 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-216ENST00000555002 M0QXV9 152 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 BEAN1Q3B7T3 259 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 C10orf99Q6UWK7 81 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 PLA2G5P39877 138 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 IGLV4-69A0A075B6H9 119 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 C19orf84I3L1E1 186 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 A8MZ25 164 aa5.12□□□□□ -1.59
SYNE2-216ENST00000555002 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
SYNE2-216ENST00000555002 FRMD6-AS1P0C7T7 363 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 PRM2P04554 102 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 Q6ZSV7 163 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 LST1O00453 97 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 IGKV2D-30A0A075B6S6 120 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 NDUFC1O43677 76 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
SYNE2-216ENST00000555002 SPRY4Q9C004 299 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 E7EUB6 86 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 TNFRSF13BO14836 293 aaPredicted RBP5.11□□□□□ -1.59
SYNE2-216ENST00000555002 ZNF80P51504 273 aaPredicted RBP5.11□□□□□ -1.59
SYNE2-216ENST00000555002 CRIPAKQ8N1N5 446 aa5.11□□□□□ -1.59
SYNE2-216ENST00000555002 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 A0A1B0GXF2 115 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 NDUFA7O95182 113 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 RBX1P62877 108 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 TP73-AS1Q9UF72 201 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 LELP1Q5T871 98 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 PSPHP1O15172 72 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 GDF5OSQ5U4N7 250 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 C2orf48Q96LS8 159 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
SYNE2-216ENST00000555002 Q6ZSR3 168 aa5.09□□□□□ -1.59
SYNE2-216ENST00000555002 C9orf116Q5BN46 136 aaPredicted RBP5.09□□□□□ -1.59
SYNE2-216ENST00000555002 MRPS12O15235 138 aaKnown RBP5.09□□□□□ -1.59
SYNE2-216ENST00000555002 IGLV3-1P01715 115 aa5.09□□□□□ -1.59
SYNE2-216ENST00000555002 ODF3Q96PU9 254 aa5.09□□□□□ -1.59
SYNE2-216ENST00000555002 PRORYQ9H606 182 aa5.09□□□□□ -1.59
SYNE2-216ENST00000555002 LINC00208Q96KT6 92 aa5.09□□□□□ -1.6
SYNE2-216ENST00000555002 ODF3BA8MYP8 253 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 K7EQG2 157 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
SYNE2-216ENST00000555002 OXLD1Q5BKU9 147 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 Q9BRP9 147 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 M0QY20 66 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 XGP55808 180 aa5.08□□□□□ -1.6
SYNE2-216ENST00000555002 EBI3Q14213 229 aa5.07□□□□□ -1.6
SYNE2-216ENST00000555002 CCDC179H3BU77 68 aa5.07□□□□□ -1.6
SYNE2-216ENST00000555002 CRIP2P52943 208 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-216ENST00000555002 SMIM11BQ8TCY0 68 aa5.07□□□□□ -1.6
SYNE2-216ENST00000555002 LRRC75A-AS1Q8N1F1 130 aa5.07□□□□□ -1.6
SYNE2-216ENST00000555002 DEFB116Q30KQ4 102 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 C1orf134Q5TEV5 83 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 PYGO1Q9Y3Y4 419 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 COL4A4P53420 1690 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-216ENST00000555002 LINC00959A0A1B0GUT2 108 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 BRI3O95415 125 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 LMO4P61968 165 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 TSHBP01222 138 aa5.06□□□□□ -1.6
SYNE2-216ENST00000555002 MAPKAPK5-AS1Q8N8E1 139 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 H0Y9P7 68 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 KRTAP27-1Q3LI81 207 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 SMR3AQ99954 134 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 EPG5Q9HCE0 2579 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 CYSRT1A8MQ03 144 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 IGLV1-47P01700 117 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
SYNE2-216ENST00000555002 C6orf223Q8N319 242 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 Q8NA96 180 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 U3KQK5 164 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 IGFL2Q6UWQ7 119 aa5.05□□□□□ -1.6
SYNE2-216ENST00000555002 TRBV6-4A0A1B0GX49 114 aa5.04□□□□□ -1.6
SYNE2-216ENST00000555002 PRR3P79522 188 aaKnown RBP5.04□□□□□ -1.6
SYNE2-216ENST00000555002 TRBV30A0A0K0K1B3 111 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms