RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
APEX1-208ENST00000554813 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
APEX1-208ENST00000554813 IGLV4-3A0A075B6K6 122 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 NPSP0C0P6 89 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 FABP9Q0Z7S8 132 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
APEX1-208ENST00000554813 Q6ZN92 141 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 LINC00526Q96FQ7 95 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
APEX1-208ENST00000554813 VCX2Q9H322 139 aa8.47□□□□□ -1.05
APEX1-208ENST00000554813 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
APEX1-208ENST00000554813 PANO1I0J062 215 aa8.46□□□□□ -1.06
APEX1-208ENST00000554813 CARD19Q96LW7 228 aa8.46□□□□□ -1.06
APEX1-208ENST00000554813 C2orf88Q9BSF0 95 aa8.46□□□□□ -1.06
APEX1-208ENST00000554813 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
APEX1-208ENST00000554813 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
APEX1-208ENST00000554813 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
APEX1-208ENST00000554813 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
APEX1-208ENST00000554813 IGIPA6NJ69 53 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 TOMM6Q96B49 74 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 C2orf48Q96LS8 159 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
APEX1-208ENST00000554813 A0A087WYN8 130 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 AMELXQ99217 191 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
APEX1-208ENST00000554813 A0A087WZ39 114 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 F8WDY8 70 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 UBE2D1P51668 147 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 SPAG11BQ08648 103 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 MAJINQ3KP22 176 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 ORAOV1Q8WV07 137 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 SMCO4Q9NRQ5 59 aa8.42□□□□□ -1.06
APEX1-208ENST00000554813 Q6ZRU5 148 aa8.41□□□□□ -1.06
APEX1-208ENST00000554813 ERASQ7Z444 233 aa8.41□□□□□ -1.06
APEX1-208ENST00000554813 A0A096LNI7 61 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 RPL37AP61513 92 aaKnown RBP8.4□□□□□ -1.06
APEX1-208ENST00000554813 SEC11AP67812 179 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
APEX1-208ENST00000554813 RNF151Q2KHN1 245 aa8.39□□□□□ -1.07
APEX1-208ENST00000554813 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
APEX1-208ENST00000554813 STPG4Q8N801 248 aa8.39□□□□□ -1.07
APEX1-208ENST00000554813 NDUFA1O15239 70 aa8.38□□□□□ -1.07
APEX1-208ENST00000554813 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
APEX1-208ENST00000554813 MRPL35Q9NZE8 188 aaKnown RBP8.38□□□□□ -1.07
APEX1-208ENST00000554813 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
APEX1-208ENST00000554813 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
APEX1-208ENST00000554813 HERVK_113P63121 156 aa8.37□□□□□ -1.07
APEX1-208ENST00000554813 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
APEX1-208ENST00000554813 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
APEX1-208ENST00000554813 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
APEX1-208ENST00000554813 LINC00614P0C842 121 aa8.36□□□□□ -1.07
APEX1-208ENST00000554813 RAB5BP61020 215 aa8.36□□□□□ -1.07
APEX1-208ENST00000554813 C18orf32Q8TCD1 76 aa8.36□□□□□ -1.07
APEX1-208ENST00000554813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
APEX1-208ENST00000554813 PRSS2P07478 247 aa8.35□□□□□ -1.07
APEX1-208ENST00000554813 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
APEX1-208ENST00000554813 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
APEX1-208ENST00000554813 SLC7A5P1Q8MH63 180 aa8.35□□□□□ -1.07
APEX1-208ENST00000554813 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
APEX1-208ENST00000554813 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
APEX1-208ENST00000554813 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
APEX1-208ENST00000554813 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
APEX1-208ENST00000554813 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
APEX1-208ENST00000554813 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
APEX1-208ENST00000554813 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
APEX1-208ENST00000554813 CKS1BP61024 79 aa8.33□□□□□ -1.08
APEX1-208ENST00000554813 PMVKQ15126 192 aa8.33□□□□□ -1.08
APEX1-208ENST00000554813 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
APEX1-208ENST00000554813 C10orf25Q5T742 122 aa8.33□□□□□ -1.08
APEX1-208ENST00000554813 TRBV30A0A0K0K1B3 111 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 LINC00469Q8N7U9 141 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 TOMM7Q9P0U1 55 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 C6orf48Q9UBA6 75 aa8.32□□□□□ -1.08
APEX1-208ENST00000554813 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
APEX1-208ENST00000554813 HBDP02042 147 aa8.31□□□□□ -1.08
APEX1-208ENST00000554813 TLX1NBP0CAT3 122 aa8.31□□□□□ -1.08
APEX1-208ENST00000554813 CBLN2Q8IUK8 224 aa8.31□□□□□ -1.08
APEX1-208ENST00000554813 Q8IZM0 81 aa8.31□□□□□ -1.08
APEX1-208ENST00000554813 A0A096LNJ9 63 aa8.3□□□□□ -1.08
APEX1-208ENST00000554813 J3QL48 77 aa8.3□□□□□ -1.08
APEX1-208ENST00000554813 NDUFA6P56556 154 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms