RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
VTI1B-204ENST00000554659 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
VTI1B-204ENST00000554659 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
VTI1B-204ENST00000554659 HCFC1P51610 2035 aa10.22□□□□□ -0.77
VTI1B-204ENST00000554659 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
VTI1B-204ENST00000554659 Q6Q795 121 aa10.21□□□□□ -0.77
VTI1B-204ENST00000554659 CLUHP3Q96NS8 147 aa10.21□□□□□ -0.77
VTI1B-204ENST00000554659 BBC3Q96PG8 261 aaPredicted RBP10.21□□□□□ -0.77
VTI1B-204ENST00000554659 PRO3102Q9H379 93 aa10.21□□□□□ -0.77
VTI1B-204ENST00000554659 SERP1Q9Y6X1 66 aa10.21□□□□□ -0.78
VTI1B-204ENST00000554659 SMIM26A0A096LP01 95 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 M0QXV9 152 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 COX17Q14061 63 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 NAV3Q8IVL0 2385 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 MUC7Q8TAX7 377 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 FAM30AQ9NZY2 134 aa10.2□□□□□ -0.78
VTI1B-204ENST00000554659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
VTI1B-204ENST00000554659 UBE2D3P61077 147 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 UBE2D2P62837 147 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 M0R378 163 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 Q6JHZ5 121 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 HIVEP3Q5T1R4 2406 aa10.19□□□□□ -0.78
VTI1B-204ENST00000554659 IGHV4-30-4P0DP06 118 aa10.18□□□□□ -0.78
VTI1B-204ENST00000554659 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
VTI1B-204ENST00000554659 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
VTI1B-204ENST00000554659 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
VTI1B-204ENST00000554659 Q8IZM0 81 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 DHRS4-AS1Q9P1J3 65 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 HILS1P60008 231 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 LELP1Q5T871 98 aa10.17□□□□□ -0.78
VTI1B-204ENST00000554659 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
VTI1B-204ENST00000554659 ABCA2Q9BZC7 2435 aa10.16□□□□□ -0.78
VTI1B-204ENST00000554659 PRRC2AP48634 2157 aaKnown RBP10.16□□□□□ -0.78
VTI1B-204ENST00000554659 LINC00242Q5T6M2 205 aa10.15□□□□□ -0.78
VTI1B-204ENST00000554659 DSCAMO60469 2012 aa10.15□□□□□ -0.78
VTI1B-204ENST00000554659 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.78
VTI1B-204ENST00000554659 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.79
VTI1B-204ENST00000554659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.14□□□□□ -0.79
VTI1B-204ENST00000554659 PMAIP1Q13794 54 aa10.14□□□□□ -0.79
VTI1B-204ENST00000554659 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
VTI1B-204ENST00000554659 A0A096LNJ9 63 aa10.14□□□□□ -0.79
VTI1B-204ENST00000554659 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
VTI1B-204ENST00000554659 PRM2P04554 102 aa10.14□□□□□ -0.79
VTI1B-204ENST00000554659 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
VTI1B-204ENST00000554659 A0A087WVE0 104 aa10.13□□□□□ -0.79
VTI1B-204ENST00000554659 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
VTI1B-204ENST00000554659 TANC2Q9HCD6 1990 aa10.13□□□□□ -0.79
VTI1B-204ENST00000554659 SMIM1B2RUZ4 78 aa10.12□□□□□ -0.79
VTI1B-204ENST00000554659 CCDC168Q8NDH2 2452 aa10.12□□□□□ -0.79
VTI1B-204ENST00000554659 TRAV7A0A075B6U4 112 aa10.12□□□□□ -0.79
VTI1B-204ENST00000554659 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
VTI1B-204ENST00000554659 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
VTI1B-204ENST00000554659 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
VTI1B-204ENST00000554659 LRP4O75096 1905 aa10.11□□□□□ -0.79
VTI1B-204ENST00000554659 ARHGAP32A7KAX9 2087 aa10.11□□□□□ -0.79
VTI1B-204ENST00000554659 CEP192Q8TEP8 1941 aa10.11□□□□□ -0.79
VTI1B-204ENST00000554659 CHCHD7Q9BUK0 85 aa10.11□□□□□ -0.79
VTI1B-204ENST00000554659 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
VTI1B-204ENST00000554659 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
VTI1B-204ENST00000554659 BRI3O95415 125 aa10.1□□□□□ -0.79
VTI1B-204ENST00000554659 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
VTI1B-204ENST00000554659 KPRPQ5T749 579 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-204ENST00000554659 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
VTI1B-204ENST00000554659 UTRNP46939 3433 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 AMELXQ99217 191 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
VTI1B-204ENST00000554659 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
VTI1B-204ENST00000554659 ZNF706Q9Y5V0 76 aaPredicted RBP10.08□□□□□ -0.8
VTI1B-204ENST00000554659 ODF3L2Q3SX64 289 aa10.08□□□□□ -0.8
VTI1B-204ENST00000554659 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
VTI1B-204ENST00000554659 CSDC2Q9Y534 153 aaKnown RBP10.07□□□□□ -0.8
VTI1B-204ENST00000554659 CYSRT1A8MQ03 144 aa10.07□□□□□ -0.8
VTI1B-204ENST00000554659 EDN2P20800 178 aa10.07□□□□□ -0.8
VTI1B-204ENST00000554659 CDSNQ15517 529 aa10.06□□□□□ -0.8
VTI1B-204ENST00000554659 Q8N814 137 aa10.06□□□□□ -0.8
VTI1B-204ENST00000554659 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
VTI1B-204ENST00000554659 ZNF580Q9UK33 172 aa10.06□□□□□ -0.8
VTI1B-204ENST00000554659 AVPP01185 164 aa10.05□□□□□ -0.8
VTI1B-204ENST00000554659 COX6A2Q02221 97 aa10.05□□□□□ -0.8
VTI1B-204ENST00000554659 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
VTI1B-204ENST00000554659 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
VTI1B-204ENST00000554659 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
VTI1B-204ENST00000554659 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
VTI1B-204ENST00000554659 PRYO14603 147 aa10.03□□□□□ -0.8
VTI1B-204ENST00000554659 PSPHP1O15172 72 aa10.03□□□□□ -0.8
VTI1B-204ENST00000554659 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
VTI1B-204ENST00000554659 Q8N3U1 123 aa10.03□□□□□ -0.8
VTI1B-204ENST00000554659 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.8
VTI1B-204ENST00000554659 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.8
VTI1B-204ENST00000554659 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
VTI1B-204ENST00000554659 Q6ZVQ6 151 aa10.02□□□□□ -0.81
VTI1B-204ENST00000554659 A0A087WYN8 130 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms