RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 IGHV3-33P01772 117 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 IGHV3-30-3P0DP02 117 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 PLNP26678 52 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 PKIAP61925 76 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 PMVKQ15126 192 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 Q8N814 137 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 ATP6V0E2Q8NHE4 81 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
SHMT2-215ENST00000554656 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 H0Y8G0 127 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 PSCAO43653 123 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 ZNF25P17030 456 aaPredicted RBP7.01□□□□□ -1.29
SHMT2-215ENST00000554656 LELP1Q5T871 98 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
SHMT2-215ENST00000554656 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
SHMT2-215ENST00000554656 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
SHMT2-215ENST00000554656 TRAV8-6A0A0B4J262 113 aa7□□□□□ -1.29
SHMT2-215ENST00000554656 IGKCP01834 107 aa7□□□□□ -1.29
SHMT2-215ENST00000554656 AMELXQ99217 191 aa7□□□□□ -1.29
SHMT2-215ENST00000554656 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
SHMT2-215ENST00000554656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
SHMT2-215ENST00000554656 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
SHMT2-215ENST00000554656 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 DGAT2L7PQ6IED9 249 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 Q6ZSA8 131 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 VCX2Q9H322 139 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 CST9LQ9H4G1 147 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 MRPL35Q9NZE8 188 aaKnown RBP6.99□□□□□ -1.29
SHMT2-215ENST00000554656 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
SHMT2-215ENST00000554656 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 UBE2L6O14933 153 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 LECT2O14960 151 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 FGF6P10767 208 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 DEFB104AQ8WTQ1 72 aa6.98□□□□□ -1.29
SHMT2-215ENST00000554656 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
SHMT2-215ENST00000554656 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
SHMT2-215ENST00000554656 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SHMT2-215ENST00000554656 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
SHMT2-215ENST00000554656 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 IGLC3P0DOY3 106 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 SEC11AP67812 179 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 AMMECR1LQ6DCA0 310 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
SHMT2-215ENST00000554656 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 LINC01620Q4KN68 170 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 Q6ZUT4 128 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 PRO1933Q9H354 126 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 UQCR10Q9UDW1 63 aa6.95□□□□□ -1.3
SHMT2-215ENST00000554656 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
SHMT2-215ENST00000554656 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 HERVK_113P61574 105 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 MAJINQ3KP22 176 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 LINC00528Q8N1L1 170 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
SHMT2-215ENST00000554656 MIEN1Q9BRT3 115 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 TM2D2Q9BX73 214 aa6.94□□□□□ -1.3
SHMT2-215ENST00000554656 TRAV8-3A0A0A6YYJ7 113 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 CCL25O15444 150 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 DLEU1O43261 78 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 COX8AP10176 69 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 DDTP30046 118 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 UBE2D1P51668 147 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
SHMT2-215ENST00000554656 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 CHAC1Q9BUX1 264 aa6.93□□□□□ -1.3
SHMT2-215ENST00000554656 IGLV5-45A0A087WSX0 123 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 E9PLD3 99 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 GAGE6Q13070 117 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 SCXQ7RTU7 201 aa6.92□□□□□ -1.3
SHMT2-215ENST00000554656 PCP4L1A6NKN8 68 aa6.91□□□□□ -1.3
SHMT2-215ENST00000554656 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
SHMT2-215ENST00000554656 RBX1P62877 108 aa6.91□□□□□ -1.3
SHMT2-215ENST00000554656 HERVK_113P63121 156 aa6.91□□□□□ -1.3
SHMT2-215ENST00000554656 STPG4Q8N801 248 aa6.91□□□□□ -1.3
SHMT2-215ENST00000554656 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
SHMT2-215ENST00000554656 J3QL48 77 aa6.9□□□□□ -1.3
SHMT2-215ENST00000554656 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
SHMT2-215ENST00000554656 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.3
SHMT2-215ENST00000554656 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
SHMT2-215ENST00000554656 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
SHMT2-215ENST00000554656 KLK12Q9UKR0 248 aa6.9□□□□□ -1.3
SHMT2-215ENST00000554656 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
SHMT2-215ENST00000554656 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 TMEM262E9PQX1 116 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 H3BRM9 83 aa6.89□□□□□ -1.31
SHMT2-215ENST00000554656 RNASE13Q5GAN3 156 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms