RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CMTM2Q8TAZ6 248 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 NPCDR1Q9BY65 106 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 BET1LQ9NYM9 111 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
CPSF6-206ENST00000550987 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-206ENST00000550987 IGKV1-9A0A0C4DH69 117 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 LECT2O14960 151 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 HBDP02042 147 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 GYPAP02724 150 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
CPSF6-206ENST00000550987 TRGC1P0CF51 173 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 CRYGAP11844 174 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 BLCAPP62952 87 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 MRPL51Q4U2R6 128 aaKnown RBP2.88□□□□□ -1.95
CPSF6-206ENST00000550987 FAM27BQ5VT28 67 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 Q6AWC8 147 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 SCGB3A1Q96QR1 104 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 S100A13Q99584 98 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 AGPAT4-IT1Q9H0P7 198 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 SLC35B3Q9H1N7 401 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 PRO1933Q9H354 126 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 EPDR1Q9UM22 224 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 R4GN34 69 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 TNCP24821 2201 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 DSCAML1Q8TD84 2053 aa2.88□□□□□ -1.95
CPSF6-206ENST00000550987 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 H3BT86 120 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 LEPROTO15243 131 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 PSCAO43653 123 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 TCL1BO95988 128 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 IGHV3-30-3P0DP02 117 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 TPT1P13693 172 aaKnown RBP2.87□□□□□ -1.95
CPSF6-206ENST00000550987 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
CPSF6-206ENST00000550987 MRPS36P82909 103 aaKnown RBP2.87□□□□□ -1.95
CPSF6-206ENST00000550987 C10orf128Q5T292 105 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 HCP5Q6MZN7 132 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 C10orf99Q6UWK7 81 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 OTOSQ8NHW6 89 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 WFDC6Q9BQY6 131 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 KAAG1Q9UBP8 84 aa2.87□□□□□ -1.95
CPSF6-206ENST00000550987 IQCF6A8MYZ5 107 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 MCRIP1C9JLW8 97 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 HYPMO75409 117 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 IGHV3-7P01780 117 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 TRACP01848 142 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 SMR3BP02814 79 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-206ENST00000550987 ASAH2BP0C7U1 165 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 IGLC1P0CG04 106 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 IL7P13232 177 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 FABP4P15090 132 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 S100A3P33764 101 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 TSPEAR-AS2P59090 65 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 PCBD1P61457 104 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 SNRPD3P62318 126 aaKnown RBP2.86□□□□□ -1.95
CPSF6-206ENST00000550987 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 ZNF826PQ6ZT77 177 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 Q6ZUT4 128 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 DYNAPQ8N1N2 210 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 ZFAND2AQ8N6M9 145 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 ATG5Q9H1Y0 275 aa2.86□□□□□ -1.95
CPSF6-206ENST00000550987 FAM24AA6NFZ4 105 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 M0R1W7 72 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 M0R2P5 195 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 NPYP01303 97 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 SAA1P0DJI8 122 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-206ENST00000550987 RNASE2P10153 161 aaKnown RBP2.85□□□□□ -1.95
CPSF6-206ENST00000550987 SLC25A4P12235 298 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 HRES1P13985 223 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 NFYAP23511 347 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-206ENST00000550987 GNG11P61952 73 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 ZNF705AQ6ZN79 300 aaPredicted RBP2.85□□□□□ -1.95
CPSF6-206ENST00000550987 SPATA12Q7Z6I5 190 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 FAM216BQ8N7L0 139 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 ATP6V0E2Q8NHE4 81 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 S100ZQ8WXG8 99 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 ZC2HC1AQ96GY0 325 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 C11orf1Q9H5F2 150 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 BCL2L10Q9HD36 194 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 TPRKBQ9Y3C4 175 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
CPSF6-206ENST00000550987 DNAH8Q96JB1 4490 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 LOC107986453A0A1B0GWG9 222 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 H3BQ15 152 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 SSSCA1O60232 199 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 TFF1P04155 84 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 GYPBP06028 91 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 HLA-DMBP28068 263 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 PEA15Q15121 130 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 ASB16-AS1Q495Z4 193 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 C12orf73Q69YU5 71 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 DEFB104AQ8WTQ1 72 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 NHP2Q9NX24 153 aaKnown RBP2.84□□□□□ -1.95
CPSF6-206ENST00000550987 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
CPSF6-206ENST00000550987 K7ERJ3 54 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms