RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 A0A1B0GVY2 172 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 RTL8CO15255 209 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 FGF6P10767 208 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 ZNF25P17030 456 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 PKIAP61925 76 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 ODF1Q14990 250 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 LELP1Q5T871 98 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 AMELXQ99217 191 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 C12orf57Q99622 126 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 OPRPNQ99935 248 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 CHCHD5Q9BSY4 110 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 KIAA1109Q2LD37 5005 aa4.21□□□□□ -1.74
DEPDC4-209ENST00000550587 H0Y8G0 127 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 S100A12P80511 92 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 GAGE6Q13070 117 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 ESRGQ1W209 222 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 AMMECR1LQ6DCA0 310 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 OR5A1Q8NGJ0 315 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 CDC42SE2Q9NRR3 84 aa4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 CHTOPQ9Y3Y2 248 aaKnown RBP4.2□□□□□ -1.74
DEPDC4-209ENST00000550587 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 TRAV9-2A0A087WT02 112 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 TRAV8-6A0A0B4J262 113 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 C16orf90A8MZG2 172 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 F8VRH5 84 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 DPM2O94777 84 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 IGKCP01834 107 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 PLNP26678 52 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 CCL18P55774 89 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 ZC2HC1BQ5TFG8 222 aa4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 MRPL35Q9NZE8 188 aaKnown RBP4.19□□□□□ -1.74
DEPDC4-209ENST00000550587 CCL25O15444 150 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 RBX1P62877 108 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 Q6ZR54 194 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 FAM19A3Q7Z5A8 133 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 NFE4Q86UQ8 179 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 ATOH7Q8N100 152 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 PMCHL2Q9BQD1 86 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 C2orf88Q9BSF0 95 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 VAMP8Q9BV40 100 aa4.18□□□□□ -1.74
DEPDC4-209ENST00000550587 IGLV4-69A0A075B6H9 119 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 TINCRA0A1B0GVN0 87 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 HSBP1L1C9JCN9 74 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 CDK2AP2O75956 126 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 IGLC3P0DOY3 106 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 GCSHP23434 173 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 UBE2D1P51668 147 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 SEC11AP67812 179 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 MPV17L2Q567V2 206 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 RNASE13Q5GAN3 156 aaKnown RBP4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 Q6ZUT4 128 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 MAPKAPK5-AS1Q8N8E1 139 aa4.17□□□□□ -1.74
DEPDC4-209ENST00000550587 NBDYA0A0U1RRE5 68 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 C11orf86A6NJI1 115 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 MAJINQ3KP22 176 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 SPATA45Q537H7 98 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 TTC32Q5I0X7 151 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 STPG4Q8N801 248 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 MRPS16Q9Y3D3 137 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 FRAS1Q86XX4 4008 aa4.16□□□□□ -1.74
DEPDC4-209ENST00000550587 IGLV5-45A0A087WSX0 123 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC00959A0A1B0GUT2 108 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 ANGP03950 147 aaKnown RBP4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 HERVK_113P63121 156 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 SS18Q15532 418 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC01556Q5JQF7 62 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC00269Q8N2A0 174 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 UPK3BQ9BT76 320 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 CHAC1Q9BUX1 264 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 PRR34Q9NV39 138 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 PAM16Q9Y3D7 125 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC00588Q9Y4M8 146 aa4.15□□□□□ -1.75
DEPDC4-209ENST00000550587 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 H3BRM9 83 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 K7EP13 123 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 SIVA1O15304 175 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 DNAH10OSP0CZ25 163 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 ZNF22P17026 224 aaPredicted RBP4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 COX6A2Q02221 97 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 REG3AQ06141 175 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 TMEM170BQ5T4T1 132 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 Q9H8V8 135 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 CDKN2A-AS1Q9UH64 79 aa4.14□□□□□ -1.75
DEPDC4-209ENST00000550587 HERC1Q15751 4861 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms