RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 UFSP1Q6NVU6 142 aa8.9□□□□□ -0.99
NR4A1-215ENST00000550557 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 hADV29S1A0JD25 119 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 LINC00467Q9BRT7 94 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 NCR3O14931 201 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
NR4A1-215ENST00000550557 GAS8-AS1O95177 125 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 Q8N2B8 174 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 NRACQ8N912 160 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 LINC00643Q86TS7 51 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
NR4A1-215ENST00000550557 LOC100131303A0A0U1RQF7 123 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 FAM236AA0A1B0GUQ0 79 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 FAM236BA0A1B0GV22 79 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 A0A1B0GX51 115 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 COX8CQ7Z4L0 72 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 USP24Q9UPU5 2620 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 M0QY20 66 aa8.87□□□□□ -0.99
NR4A1-215ENST00000550557 J3KT08 172 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 PTH2Q96A98 100 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 TRIOO75962 3097 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 TCL1BO95988 128 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 DAND5Q8N907 189 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 ATRQ13535 2644 aa8.86□□□□□ -0.99
NR4A1-215ENST00000550557 A0A096LNJ9 63 aa8.85□□□□□ -0.99
NR4A1-215ENST00000550557 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
NR4A1-215ENST00000550557 PRR9Q5T870 116 aa8.85□□□□□ -0.99
NR4A1-215ENST00000550557 NREPQ16612 68 aa8.85□□□□□ -0.99
NR4A1-215ENST00000550557 DIRC1Q969H9 104 aa8.85□□□□□ -0.99
NR4A1-215ENST00000550557 FHL3Q13643 280 aa8.84□□□□□ -0.99
NR4A1-215ENST00000550557 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
NR4A1-215ENST00000550557 MP68P56378 58 aa8.84□□□□□ -0.99
NR4A1-215ENST00000550557 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
NR4A1-215ENST00000550557 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
NR4A1-215ENST00000550557 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
NR4A1-215ENST00000550557 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 C1orf158Q8N1D5 194 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 A0A0J9YXY3 114 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 NDUFB1O75438 58 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 C9orf85Q96MD7 179 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 NDUFS5O43920 106 aa8.82□□□□□ -1
NR4A1-215ENST00000550557 NDUFC2O95298 119 aa8.81□□□□□ -1
NR4A1-215ENST00000550557 XAGE1AQ9HD64 81 aa8.81□□□□□ -1
NR4A1-215ENST00000550557 CD164L2Q6UWJ8 174 aa8.8□□□□□ -1
NR4A1-215ENST00000550557 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
NR4A1-215ENST00000550557 CFAP46Q8IYW2 2715 aa8.8□□□□□ -1
NR4A1-215ENST00000550557 CLEC2BQ92478 149 aa8.8□□□□□ -1
NR4A1-215ENST00000550557 UBE2D1P51668 147 aa8.8□□□□□ -1
NR4A1-215ENST00000550557 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
NR4A1-215ENST00000550557 SETXQ7Z333 2677 aaKnown RBP8.79□□□□□ -1
NR4A1-215ENST00000550557 MT-ATP8P03928 68 aa8.79□□□□□ -1
NR4A1-215ENST00000550557 TMEM223A0PJW6 202 aa8.79□□□□□ -1
NR4A1-215ENST00000550557 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
NR4A1-215ENST00000550557 IGLV4-69A0A075B6H9 119 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 A0A096LNI7 61 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 CHCHD7Q9BUK0 85 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 IGLV4-3A0A075B6K6 122 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
NR4A1-215ENST00000550557 SZT2Q5T011 3432 aa8.77□□□□□ -1
NR4A1-215ENST00000550557 COX7BP24311 80 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 UBE2D3P61077 147 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 UBE2D2P62837 147 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
NR4A1-215ENST00000550557 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 BEAN1Q3B7T3 259 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 TRBV27A0A0K0K1C4 114 aa8.77□□□□□ -1.01
NR4A1-215ENST00000550557 CENPEQ02224 2701 aa8.76□□□□□ -1.01
NR4A1-215ENST00000550557 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
NR4A1-215ENST00000550557 FSHBP01225 129 aa8.76□□□□□ -1.01
NR4A1-215ENST00000550557 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
NR4A1-215ENST00000550557 PYGO1Q9Y3Y4 419 aa8.75□□□□□ -1.01
NR4A1-215ENST00000550557 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
NR4A1-215ENST00000550557 UQCRQO14949 82 aa8.75□□□□□ -1.01
NR4A1-215ENST00000550557 TIMM17BO60830 172 aa8.75□□□□□ -1.01
NR4A1-215ENST00000550557 NDUFV3P56181 108 aaKnown RBP8.75□□□□□ -1.01
NR4A1-215ENST00000550557 IBA57-AS1B1ANH7 110 aa8.74□□□□□ -1.01
NR4A1-215ENST00000550557 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
NR4A1-215ENST00000550557 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
NR4A1-215ENST00000550557 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
NR4A1-215ENST00000550557 FHL2Q14192 279 aa8.73□□□□□ -1.01
NR4A1-215ENST00000550557 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
NR4A1-215ENST00000550557 MDFIQ99750 246 aa8.72□□□□□ -1.01
NR4A1-215ENST00000550557 TSHBP01222 138 aa8.72□□□□□ -1.01
NR4A1-215ENST00000550557 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
NR4A1-215ENST00000550557 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
NR4A1-215ENST00000550557 LINC01546A6NGU7 62 aa8.72□□□□□ -1.01
NR4A1-215ENST00000550557 FLNAP21333 2647 aaKnown RBP8.72□□□□□ -1.01
NR4A1-215ENST00000550557 ITPR3Q14573 2671 aa8.71□□□□□ -1.01
NR4A1-215ENST00000550557 WFDC9Q8NEX5 89 aa8.71□□□□□ -1.01
NR4A1-215ENST00000550557 LINC00308Q8TCZ7 52 aa8.71□□□□□ -1.01
NR4A1-215ENST00000550557 C14orf132Q9NPU4 83 aa8.71□□□□□ -1.01
NR4A1-215ENST00000550557 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
NR4A1-215ENST00000550557 TRIAP1O43715 76 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms