RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 IGHV3OR16-9A0A0B4J2B5 98 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 MALP21145 153 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 UBE2D1P51668 147 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 COX6A2Q02221 97 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 LINC00242Q5T6M2 205 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 C2orf88Q9BSF0 95 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 HERC2O95714 4834 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 DNAH8Q96JB1 4490 aa14.59□□□□□ -0.07
BRF1-216ENST00000550208 A0A096LNJ9 63 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 LINC01549A6NIU2 74 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 XGP55808 180 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 CNBPP62633 177 aaKnown RBP14.58□□□□□ -0.08
BRF1-216ENST00000550208 PMCHL1Q16048 86 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 C9orf163Q8N9P6 203 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 LINC00526Q96FQ7 95 aa14.58□□□□□ -0.08
BRF1-216ENST00000550208 PAPPA-AS1Q5QFB9 102 aa14.57□□□□□ -0.08
BRF1-216ENST00000550208 HBDP02042 147 aa14.54□□□□□ -0.08
BRF1-216ENST00000550208 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.53□□□□□ -0.08
BRF1-216ENST00000550208 ZNF561-AS1K7EIQ3 104 aa14.53□□□□□ -0.08
BRF1-216ENST00000550208 HAMPP81172 84 aa14.53□□□□□ -0.08
BRF1-216ENST00000550208 APOMO95445 188 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 PDZD11Q5EBL8 140 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 SDIM1Q6ZPB5 146 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 FAM19A3Q7Z5A8 133 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 BAGE3Q86Y29 109 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 CHCHD1Q96BP2 118 aaKnown RBP14.52□□□□□ -0.09
BRF1-216ENST00000550208 KRTAP17-1Q9BYP8 105 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 CST9LQ9H4G1 147 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 HSPG2P98160 4391 aa14.52□□□□□ -0.09
BRF1-216ENST00000550208 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.51□□□□□ -0.09
BRF1-216ENST00000550208 Q6ZSA8 131 aa14.51□□□□□ -0.09
BRF1-216ENST00000550208 IGLV4-69A0A075B6H9 119 aa14.5□□□□□ -0.09
BRF1-216ENST00000550208 IGHV3-64A0A075B6Q5 118 aa14.5□□□□□ -0.09
BRF1-216ENST00000550208 A0A087WZ39 114 aa14.5□□□□□ -0.09
BRF1-216ENST00000550208 A0A0J9YXV3 536 aa14.5□□□□□ -0.09
BRF1-216ENST00000550208 PMVKQ15126 192 aa14.49□□□□□ -0.09
BRF1-216ENST00000550208 ORAOV1Q8WV07 137 aa14.48□□□□□ -0.09
BRF1-216ENST00000550208 NDUFA6P56556 154 aa14.47□□□□□ -0.09
BRF1-216ENST00000550208 SEC11AP67812 179 aa14.47□□□□□ -0.09
BRF1-216ENST00000550208 SPAG11BQ08648 103 aa14.47□□□□□ -0.09
BRF1-216ENST00000550208 SYCNQ0VAF6 134 aa14.47□□□□□ -0.09
BRF1-216ENST00000550208 OR10D4PQ8NGN7 298 aa14.47□□□□□ -0.09
BRF1-216ENST00000550208 HERVK_113P63121 156 aa14.46□□□□□ -0.09
BRF1-216ENST00000550208 GEMIN7Q9H840 131 aaKnown RBP14.46□□□□□ -0.09
BRF1-216ENST00000550208 HSBP1O75506 76 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 ATP5LO75964 103 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 LINC00310P59036 64 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 LINC01561Q8N1V8 128 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 FAM19A2Q8N3H0 131 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 C2orf48Q96LS8 159 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 CARD19Q96LW7 228 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 CDKN2A-AS1Q9UH64 79 aa14.45□□□□□ -0.1
BRF1-216ENST00000550208 PANO1I0J062 215 aa14.44□□□□□ -0.1
BRF1-216ENST00000550208 NUPR1O60356 82 aa14.44□□□□□ -0.1
BRF1-216ENST00000550208 SERF1AO75920 110 aa14.44□□□□□ -0.1
BRF1-216ENST00000550208 Q6ZRU5 148 aa14.44□□□□□ -0.1
BRF1-216ENST00000550208 CAMK2N2Q96S95 79 aa14.44□□□□□ -0.1
BRF1-216ENST00000550208 TINCRA0A1B0GVN0 87 aa14.43□□□□□ -0.1
BRF1-216ENST00000550208 SMR3BP02814 79 aaPredicted RBP14.43□□□□□ -0.1
BRF1-216ENST00000550208 CHAC1Q9BUX1 264 aa14.43□□□□□ -0.1
BRF1-216ENST00000550208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.43□□□□□ -0.1
BRF1-216ENST00000550208 KIAA0087Q14695 138 aa14.42□□□□□ -0.1
BRF1-216ENST00000550208 SCXQ7RTU7 201 aa14.41□□□□□ -0.1
BRF1-216ENST00000550208 CHTF8P0CG12 524 aa14.4□□□□□ -0.1
BRF1-216ENST00000550208 Q8N1X5 172 aa14.4□□□□□ -0.1
BRF1-216ENST00000550208 LINC00469Q8N7U9 141 aa14.4□□□□□ -0.1
BRF1-216ENST00000550208 CIRBP-AS1Q8TBR5 109 aa14.4□□□□□ -0.1
BRF1-216ENST00000550208 IFI27L1Q96BM0 104 aa14.39□□□□□ -0.11
BRF1-216ENST00000550208 IGLV5-45A0A087WSX0 123 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 F8WDY8 70 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BKO60814 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BJP06899 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BOP23527 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BBP33778 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BDP58876 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BCP62807 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST2H2BEQ16778 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.38□□□□□ -0.11
BRF1-216ENST00000550208 C10orf25Q5T742 122 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 UNQ6190/PRO20217Q6UXQ8 127 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BHQ93079 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BNQ99877 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 HIST1H2BMQ99879 126 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 KRTAP4-5Q9BYR2 181 aa14.38□□□□□ -0.11
BRF1-216ENST00000550208 IGLC3P0DOY3 106 aa14.37□□□□□ -0.11
BRF1-216ENST00000550208 DPH3Q96FX2 82 aa14.37□□□□□ -0.11
BRF1-216ENST00000550208 PACRGQ96M98 296 aaPredicted RBP14.37□□□□□ -0.11
BRF1-216ENST00000550208 TOMM7Q9P0U1 55 aa14.37□□□□□ -0.11
BRF1-216ENST00000550208 NDUFA1O15239 70 aa14.36□□□□□ -0.11
BRF1-216ENST00000550208 CIRBPQ14011 172 aaKnown RBP14.36□□□□□ -0.11
BRF1-216ENST00000550208 IGKV2-24A0A0C4DH68 120 aa14.35□□□□□ -0.11
BRF1-216ENST00000550208 C2orf82Q6UX34 121 aa14.35□□□□□ -0.11
BRF1-216ENST00000550208 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
BRF1-216ENST00000550208 A0A096LNI7 61 aa14.34□□□□□ -0.11
BRF1-216ENST00000550208 PRSS2P07478 247 aa14.34□□□□□ -0.11
BRF1-216ENST00000550208 RNF151Q2KHN1 245 aa14.34□□□□□ -0.11
BRF1-216ENST00000550208 SMIM1B2RUZ4 78 aa14.33□□□□□ -0.12
BRF1-216ENST00000550208 LEPROTL1O95214 131 aa14.33□□□□□ -0.12
BRF1-216ENST00000550208 SPINK8P0C7L1 97 aa14.33□□□□□ -0.12
BRF1-216ENST00000550208 C6orf226Q5I0X4 101 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms