RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 FAM229AH3BQW9 127 aa16.71■□□□□ 0.27
CPSF6-205ENST00000550075 SDIM1Q6ZPB5 146 aa16.71■□□□□ 0.27
CPSF6-205ENST00000550075 TOMM6Q96B49 74 aa16.71■□□□□ 0.27
CPSF6-205ENST00000550075 KRTAP17-1Q9BYP8 105 aa16.71■□□□□ 0.27
CPSF6-205ENST00000550075 VCX2Q9H322 139 aa16.71■□□□□ 0.27
CPSF6-205ENST00000550075 Q5VSD8 79 aa16.7■□□□□ 0.26
CPSF6-205ENST00000550075 SLC7A5P1Q8MH63 180 aa16.7■□□□□ 0.26
CPSF6-205ENST00000550075 TIMM17AQ99595 171 aa16.7■□□□□ 0.26
CPSF6-205ENST00000550075 KRTAP4-5Q9BYR2 181 aa16.7■□□□□ 0.26
CPSF6-205ENST00000550075 LINC01546A6NGU7 62 aa16.69■□□□□ 0.26
CPSF6-205ENST00000550075 IGIPA6NJ69 53 aa16.69■□□□□ 0.26
CPSF6-205ENST00000550075 CARD19Q96LW7 228 aa16.69■□□□□ 0.26
CPSF6-205ENST00000550075 IGHV3OR16-9A0A0B4J2B5 98 aa16.67■□□□□ 0.26
CPSF6-205ENST00000550075 OR10D4PQ8NGN7 298 aa16.67■□□□□ 0.26
CPSF6-205ENST00000550075 AMELXQ99217 191 aa16.67■□□□□ 0.26
CPSF6-205ENST00000550075 SYCNQ0VAF6 134 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 ERASQ7Z444 233 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 CIRBP-AS1Q8TBR5 109 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 LINC00526Q96FQ7 95 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 YPEL4Q96NS1 127 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 SCGB3A1Q96QR1 104 aa16.66■□□□□ 0.26
CPSF6-205ENST00000550075 UBE2D1P51668 147 aa16.65■□□□□ 0.26
CPSF6-205ENST00000550075 SPAG11BQ08648 103 aa16.65■□□□□ 0.26
CPSF6-205ENST00000550075 IGLV4-69A0A075B6H9 119 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 LINC00242Q5T6M2 205 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 LINC00173Q6ZV60 143 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 CBLN2Q8IUK8 224 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 C18orf32Q8TCD1 76 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 C2orf48Q96LS8 159 aa16.64■□□□□ 0.25
CPSF6-205ENST00000550075 LINC00528Q8N1L1 170 aa16.63■□□□□ 0.25
CPSF6-205ENST00000550075 ORAOV1Q8WV07 137 aa16.63■□□□□ 0.25
CPSF6-205ENST00000550075 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.63■□□□□ 0.25
CPSF6-205ENST00000550075 SEC11AP67812 179 aa16.62■□□□□ 0.25
CPSF6-205ENST00000550075 COX6A2Q02221 97 aa16.62■□□□□ 0.25
CPSF6-205ENST00000550075 CIRBPQ14011 172 aaKnown RBP16.62■□□□□ 0.25
CPSF6-205ENST00000550075 CAMK2N2Q96S95 79 aa16.62■□□□□ 0.25
CPSF6-205ENST00000550075 PCLOQ9Y6V0 5065 aa16.61■□□□□ 0.25
CPSF6-205ENST00000550075 A0A087WZ39 114 aa16.61■□□□□ 0.25
CPSF6-205ENST00000550075 RAB5BP61020 215 aa16.61■□□□□ 0.25
CPSF6-205ENST00000550075 ZC2HC1BQ5TFG8 222 aa16.61■□□□□ 0.25
CPSF6-205ENST00000550075 ABCA13Q86UQ4 5058 aa16.61■□□□□ 0.25
CPSF6-205ENST00000550075 DPH3Q96FX2 82 aa16.6■□□□□ 0.25
CPSF6-205ENST00000550075 F8WDY8 70 aa16.59■□□□□ 0.25
CPSF6-205ENST00000550075 PLA2G1BP04054 148 aaKnown RBP16.59■□□□□ 0.25
CPSF6-205ENST00000550075 FAT1Q14517 4588 aa16.58■□□□□ 0.25
CPSF6-205ENST00000550075 LINC00614P0C842 121 aa16.58■□□□□ 0.24
CPSF6-205ENST00000550075 FAM19A3Q7Z5A8 133 aa16.58■□□□□ 0.24
CPSF6-205ENST00000550075 LINC01561Q8N1V8 128 aa16.58■□□□□ 0.24
CPSF6-205ENST00000550075 SPACA4Q8TDM5 124 aa16.58■□□□□ 0.24
CPSF6-205ENST00000550075 PANO1I0J062 215 aa16.57■□□□□ 0.24
CPSF6-205ENST00000550075 CHTF8P0CG12 524 aa16.57■□□□□ 0.24
CPSF6-205ENST00000550075 HERVK_113P63121 156 aa16.57■□□□□ 0.24
CPSF6-205ENST00000550075 Q6ZRU5 148 aa16.57■□□□□ 0.24
CPSF6-205ENST00000550075 VPS13BQ7Z7G8 4022 aa16.57■□□□□ 0.24
CPSF6-205ENST00000550075 GEMIN7Q9H840 131 aaKnown RBP16.56■□□□□ 0.24
CPSF6-205ENST00000550075 LINC00474Q9P2X8 69 aa16.56■□□□□ 0.24
CPSF6-205ENST00000550075 IGKV2-24A0A0C4DH68 120 aa16.55■□□□□ 0.24
CPSF6-205ENST00000550075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.54■□□□□ 0.24
CPSF6-205ENST00000550075 NDUFA1O15239 70 aa16.54■□□□□ 0.24
CPSF6-205ENST00000550075 HBDP02042 147 aa16.54■□□□□ 0.24
CPSF6-205ENST00000550075 LOC107984640A0A0U1RRK4 108 aa16.53■□□□□ 0.24
CPSF6-205ENST00000550075 MAJINQ3KP22 176 aa16.53■□□□□ 0.24
CPSF6-205ENST00000550075 A0A096LNI7 61 aa16.52■□□□□ 0.24
CPSF6-205ENST00000550075 INAFM2P0DMQ5 153 aa16.52■□□□□ 0.24
CPSF6-205ENST00000550075 RNF151Q2KHN1 245 aa16.52■□□□□ 0.24
CPSF6-205ENST00000550075 URB1-AS1Q96HZ7 61 aa16.52■□□□□ 0.24
CPSF6-205ENST00000550075 A0A087WYN8 130 aa16.51■□□□□ 0.23
CPSF6-205ENST00000550075 PMVKQ15126 192 aa16.51■□□□□ 0.23
CPSF6-205ENST00000550075 PACRGQ96M98 296 aaPredicted RBP16.51■□□□□ 0.23
CPSF6-205ENST00000550075 MRPL35Q9NZE8 188 aaKnown RBP16.51■□□□□ 0.23
CPSF6-205ENST00000550075 PLAC8Q9NZF1 115 aa16.5■□□□□ 0.23
CPSF6-205ENST00000550075 A0A0J9YXV3 536 aa16.49■□□□□ 0.23
CPSF6-205ENST00000550075 CST9LQ9H4G1 147 aa16.49■□□□□ 0.23
CPSF6-205ENST00000550075 SRRM2Q9UQ35 2752 aaKnown RBP16.48■□□□□ 0.23
CPSF6-205ENST00000550075 A0A096LNJ9 63 aa16.48■□□□□ 0.23
CPSF6-205ENST00000550075 TINCRA0A1B0GVN0 87 aa16.48■□□□□ 0.23
CPSF6-205ENST00000550075 PRSS2P07478 247 aa16.48■□□□□ 0.23
CPSF6-205ENST00000550075 LINC00469Q8N7U9 141 aa16.48■□□□□ 0.23
CPSF6-205ENST00000550075 CHCHD1Q96BP2 118 aaKnown RBP16.48■□□□□ 0.23
CPSF6-205ENST00000550075 ATP5LO75964 103 aa16.47■□□□□ 0.23
CPSF6-205ENST00000550075 CDKN2A-AS1Q9UH64 79 aa16.47■□□□□ 0.23
CPSF6-205ENST00000550075 PTTG1IPP53801 180 aa16.46■□□□□ 0.23
CPSF6-205ENST00000550075 RPL18AQ02543 176 aaKnown RBP16.46■□□□□ 0.23
CPSF6-205ENST00000550075 PMCHL1Q16048 86 aa16.46■□□□□ 0.23
CPSF6-205ENST00000550075 STPG4Q8N801 248 aa16.46■□□□□ 0.23
CPSF6-205ENST00000550075 GAGE2BQ13066 116 aa16.45■□□□□ 0.22
CPSF6-205ENST00000550075 KIAA0087Q14695 138 aa16.45■□□□□ 0.22
CPSF6-205ENST00000550075 TOMM7Q9P0U1 55 aa16.45■□□□□ 0.22
CPSF6-205ENST00000550075 TRGC2P03986 189 aa16.44■□□□□ 0.22
CPSF6-205ENST00000550075 RPL37AP61513 92 aaKnown RBP16.44■□□□□ 0.22
CPSF6-205ENST00000550075 PDZD11Q5EBL8 140 aa16.44■□□□□ 0.22
CPSF6-205ENST00000550075 BAGE3Q86Y29 109 aa16.44■□□□□ 0.22
CPSF6-205ENST00000550075 NDUFA6P56556 154 aa16.43■□□□□ 0.22
CPSF6-205ENST00000550075 UNQ6190/PRO20217Q6UXQ8 127 aa16.43■□□□□ 0.22
CPSF6-205ENST00000550075 Q8IZM0 81 aa16.43■□□□□ 0.22
CPSF6-205ENST00000550075 IGLV5-45A0A087WSX0 123 aa16.42■□□□□ 0.22
CPSF6-205ENST00000550075 TRBV30A0A0K0K1B3 111 aa16.42■□□□□ 0.22
CPSF6-205ENST00000550075 C7orf33Q8WU49 177 aa16.42■□□□□ 0.22
CPSF6-205ENST00000550075 CKS1BP61024 79 aa16.41■□□□□ 0.22
CPSF6-205ENST00000550075 C6orf226Q5I0X4 101 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms