RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 IMMP2LQ96T52 175 aa9.3□□□□□ -0.92
RAB5C-205ENST00000550013 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
RAB5C-205ENST00000550013 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
RAB5C-205ENST00000550013 C6orf48Q9UBA6 75 aa9.29□□□□□ -0.92
RAB5C-205ENST00000550013 F8WDY8 70 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 TLX1NBP0CAT3 122 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 C20orf78Q9BR46 151 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
RAB5C-205ENST00000550013 MUC2Q02817 5179 aa9.27□□□□□ -0.93
RAB5C-205ENST00000550013 SMDT1Q9H4I9 107 aa9.27□□□□□ -0.93
RAB5C-205ENST00000550013 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 IFITM10A6NMD0 228 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 CKS2P33552 79 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
RAB5C-205ENST00000550013 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
RAB5C-205ENST00000550013 LINC00862A6NCI5 91 aa9.25□□□□□ -0.93
RAB5C-205ENST00000550013 M0QXV9 152 aa9.25□□□□□ -0.93
RAB5C-205ENST00000550013 HBBP68871 147 aa9.25□□□□□ -0.93
RAB5C-205ENST00000550013 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
RAB5C-205ENST00000550013 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
RAB5C-205ENST00000550013 FAM74A3Q4VXF1 159 aa9.25□□□□□ -0.93
RAB5C-205ENST00000550013 TCAPO15273 167 aa9.24□□□□□ -0.93
RAB5C-205ENST00000550013 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
RAB5C-205ENST00000550013 UBE2BP63146 152 aa9.24□□□□□ -0.93
RAB5C-205ENST00000550013 KIAA0087Q14695 138 aa9.24□□□□□ -0.93
RAB5C-205ENST00000550013 PRR4Q16378 134 aa9.24□□□□□ -0.93
RAB5C-205ENST00000550013 SMIM27A0A1W2PRY6 76 aa9.23□□□□□ -0.93
RAB5C-205ENST00000550013 D6R8Y8 96 aa9.23□□□□□ -0.93
RAB5C-205ENST00000550013 NPYP01303 97 aa9.23□□□□□ -0.93
RAB5C-205ENST00000550013 ADIRFQ15847 76 aa9.23□□□□□ -0.93
RAB5C-205ENST00000550013 TGIF2-C20orf24A0A0A6YYL0 155 aa9.22□□□□□ -0.93
RAB5C-205ENST00000550013 UBE2D1P51668 147 aa9.22□□□□□ -0.93
RAB5C-205ENST00000550013 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
RAB5C-205ENST00000550013 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
RAB5C-205ENST00000550013 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.94
RAB5C-205ENST00000550013 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
RAB5C-205ENST00000550013 A0A1B0GW15 77 aa9.2□□□□□ -0.94
RAB5C-205ENST00000550013 C9JQL5 133 aa9.2□□□□□ -0.94
RAB5C-205ENST00000550013 LINC00242Q5T6M2 205 aa9.2□□□□□ -0.94
RAB5C-205ENST00000550013 IGLV4-3A0A075B6K6 122 aa9.19□□□□□ -0.94
RAB5C-205ENST00000550013 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
RAB5C-205ENST00000550013 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
RAB5C-205ENST00000550013 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
RAB5C-205ENST00000550013 NAT8Q9UHE5 227 aa9.19□□□□□ -0.94
RAB5C-205ENST00000550013 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
RAB5C-205ENST00000550013 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
RAB5C-205ENST00000550013 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
RAB5C-205ENST00000550013 F8W036 122 aa9.17□□□□□ -0.94
RAB5C-205ENST00000550013 PACRGQ96M98 296 aaPredicted RBP9.17□□□□□ -0.94
RAB5C-205ENST00000550013 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
RAB5C-205ENST00000550013 S100A8P05109 93 aa9.16□□□□□ -0.94
RAB5C-205ENST00000550013 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
RAB5C-205ENST00000550013 PPBPP02775 128 aa9.15□□□□□ -0.94
RAB5C-205ENST00000550013 RAB5AP20339 215 aa9.15□□□□□ -0.94
RAB5C-205ENST00000550013 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
RAB5C-205ENST00000550013 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
RAB5C-205ENST00000550013 TMEM141Q96I45 108 aa9.15□□□□□ -0.94
RAB5C-205ENST00000550013 CARHSP1Q9Y2V2 147 aaKnown RBP9.15□□□□□ -0.94
RAB5C-205ENST00000550013 ZNF861PO60384 105 aa9.14□□□□□ -0.95
RAB5C-205ENST00000550013 TSPAN13O95857 204 aa9.14□□□□□ -0.95
RAB5C-205ENST00000550013 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
RAB5C-205ENST00000550013 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
RAB5C-205ENST00000550013 TEX43Q6ZNM6 134 aa9.13□□□□□ -0.95
RAB5C-205ENST00000550013 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
RAB5C-205ENST00000550013 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
RAB5C-205ENST00000550013 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
RAB5C-205ENST00000550013 LINC01561Q8N1V8 128 aa9.12□□□□□ -0.95
RAB5C-205ENST00000550013 TOMM7Q9P0U1 55 aa9.12□□□□□ -0.95
RAB5C-205ENST00000550013 LOC389332A0A1B0GUA5 103 aa9.11□□□□□ -0.95
RAB5C-205ENST00000550013 PRSS2P07478 247 aa9.11□□□□□ -0.95
RAB5C-205ENST00000550013 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
RAB5C-205ENST00000550013 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
RAB5C-205ENST00000550013 A0A087X002 238 aa9.1□□□□□ -0.95
RAB5C-205ENST00000550013 NUPR1O60356 82 aa9.1□□□□□ -0.95
RAB5C-205ENST00000550013 CKS1BP61024 79 aa9.1□□□□□ -0.95
RAB5C-205ENST00000550013 Q6ZN92 141 aa9.1□□□□□ -0.95
RAB5C-205ENST00000550013 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
RAB5C-205ENST00000550013 PEA15Q15121 130 aa9.09□□□□□ -0.95
RAB5C-205ENST00000550013 AMELXQ99217 191 aa9.09□□□□□ -0.95
RAB5C-205ENST00000550013 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
RAB5C-205ENST00000550013 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
RAB5C-205ENST00000550013 C6orf226Q5I0X4 101 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 VCX2Q9H322 139 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 CYSLTR1Q9Y271 337 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
RAB5C-205ENST00000550013 Q8IZM0 81 aa9.07□□□□□ -0.96
RAB5C-205ENST00000550013 Q8N8P6 123 aa9.07□□□□□ -0.96
RAB5C-205ENST00000550013 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
RAB5C-205ENST00000550013 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
RAB5C-205ENST00000550013 MRPL55Q7Z7F7 128 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms