RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
CHMP1A-207ENST00000549328 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
CHMP1A-207ENST00000549328 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
CHMP1A-207ENST00000549328 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
CHMP1A-207ENST00000549328 CLLU1Q5K131 121 aa11.67□□□□□ -0.54
CHMP1A-207ENST00000549328 PKHD1L1Q86WI1 4243 aa11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 F8WDY8 70 aa11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 IFI27P40305 119 aaPredicted RBP11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 SPAG11BQ08648 103 aa11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 RNF151Q2KHN1 245 aa11.66□□□□□ -0.54
CHMP1A-207ENST00000549328 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
CHMP1A-207ENST00000549328 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
CHMP1A-207ENST00000549328 MAP1LC3AQ9H492 121 aa11.65□□□□□ -0.54
CHMP1A-207ENST00000549328 MT1HL1P0DM35 61 aa11.64□□□□□ -0.55
CHMP1A-207ENST00000549328 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
CHMP1A-207ENST00000549328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
CHMP1A-207ENST00000549328 Q8N8P6 123 aa11.63□□□□□ -0.55
CHMP1A-207ENST00000549328 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
CHMP1A-207ENST00000549328 IMMP2LQ96T52 175 aa11.63□□□□□ -0.55
CHMP1A-207ENST00000549328 IGLV4-3A0A075B6K6 122 aa11.62□□□□□ -0.55
CHMP1A-207ENST00000549328 K7EMI3 77 aa11.62□□□□□ -0.55
CHMP1A-207ENST00000549328 TMEM141Q96I45 108 aa11.62□□□□□ -0.55
CHMP1A-207ENST00000549328 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
CHMP1A-207ENST00000549328 TGIF2-C20orf24A0A0A6YYL0 155 aa11.61□□□□□ -0.55
CHMP1A-207ENST00000549328 UQCC3Q6UW78 93 aa11.61□□□□□ -0.55
CHMP1A-207ENST00000549328 Q6ZRP5 223 aa11.61□□□□□ -0.55
CHMP1A-207ENST00000549328 A0A087WZ39 114 aa11.6□□□□□ -0.55
CHMP1A-207ENST00000549328 ORMDL2Q53FV1 153 aa11.6□□□□□ -0.55
CHMP1A-207ENST00000549328 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
CHMP1A-207ENST00000549328 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
CHMP1A-207ENST00000549328 A0A1W2PNN7 141 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 NDUFA1O15239 70 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 NPSP0C0P6 89 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 CTDSP1Q9GZU7 261 aa11.59□□□□□ -0.55
CHMP1A-207ENST00000549328 A0A0J9YXV3 536 aa11.58□□□□□ -0.56
CHMP1A-207ENST00000549328 RPL18AQ02543 176 aaKnown RBP11.58□□□□□ -0.56
CHMP1A-207ENST00000549328 C9orf116Q5BN46 136 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-207ENST00000549328 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
CHMP1A-207ENST00000549328 NXT2Q9NPJ8 142 aaKnown RBP11.58□□□□□ -0.56
CHMP1A-207ENST00000549328 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
CHMP1A-207ENST00000549328 Q6ZN92 141 aa11.57□□□□□ -0.56
CHMP1A-207ENST00000549328 C2orf88Q9BSF0 95 aa11.57□□□□□ -0.56
CHMP1A-207ENST00000549328 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 TLX1NBP0CAT3 122 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 G0S2P27469 103 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 UBE2D1P51668 147 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 KIAA0087Q14695 138 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 AMELXQ99217 191 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 PLA2G2DQ9UNK4 145 aa11.56□□□□□ -0.56
CHMP1A-207ENST00000549328 IFITM2Q01629 132 aa11.55□□□□□ -0.56
CHMP1A-207ENST00000549328 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
CHMP1A-207ENST00000549328 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
CHMP1A-207ENST00000549328 VCX2Q9H322 139 aa11.55□□□□□ -0.56
CHMP1A-207ENST00000549328 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
CHMP1A-207ENST00000549328 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
CHMP1A-207ENST00000549328 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
CHMP1A-207ENST00000549328 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
CHMP1A-207ENST00000549328 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.57
CHMP1A-207ENST00000549328 REG3GQ6UW15 175 aa11.52□□□□□ -0.57
CHMP1A-207ENST00000549328 FAM19A3Q7Z5A8 133 aa11.52□□□□□ -0.57
CHMP1A-207ENST00000549328 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
CHMP1A-207ENST00000549328 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
CHMP1A-207ENST00000549328 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
CHMP1A-207ENST00000549328 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
CHMP1A-207ENST00000549328 PSORS1C2Q9UIG4 136 aa11.5□□□□□ -0.57
CHMP1A-207ENST00000549328 MT-ND6P03923 174 aa11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 S100PP25815 95 aa11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 SEC11AP67812 179 aa11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 PHF5AQ7RTV0 110 aaKnown RBP11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 TOMM6Q96B49 74 aa11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
CHMP1A-207ENST00000549328 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
CHMP1A-207ENST00000549328 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
CHMP1A-207ENST00000549328 PACRGQ96M98 296 aaPredicted RBP11.48□□□□□ -0.57
CHMP1A-207ENST00000549328 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 HERVK_113P63121 156 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 COX19Q49B96 90 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 ERASQ7Z444 233 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
CHMP1A-207ENST00000549328 LINC01549A6NIU2 74 aa11.46□□□□□ -0.57
CHMP1A-207ENST00000549328 PRSS2P07478 247 aa11.46□□□□□ -0.57
CHMP1A-207ENST00000549328 KRTAP10-8P60410 259 aa11.46□□□□□ -0.57
CHMP1A-207ENST00000549328 FAM168BA1KXE4 195 aa11.45□□□□□ -0.58
CHMP1A-207ENST00000549328 Q8IZM0 81 aa11.45□□□□□ -0.58
CHMP1A-207ENST00000549328 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 CKS1BP61024 79 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 C1orf137Q5JT78 98 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 C10orf91Q5T1B1 145 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 SCGB3A1Q96QR1 104 aa11.44□□□□□ -0.58
CHMP1A-207ENST00000549328 ALKBH7Q9BT30 221 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms