RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 F5H768 121 aa14.54□□□□□ -0.08
RITA1-201ENST00000548278 G3V4G9 280 aa14.54□□□□□ -0.08
RITA1-201ENST00000548278 COL6A5A8TX70 2615 aa14.53□□□□□ -0.08
RITA1-201ENST00000548278 TRAV26-1A0A087WT03 109 aa14.53□□□□□ -0.08
RITA1-201ENST00000548278 SMIM1B2RUZ4 78 aa14.53□□□□□ -0.08
RITA1-201ENST00000548278 RETNQ9HD89 108 aa14.53□□□□□ -0.08
RITA1-201ENST00000548278 LITAFQ99732 161 aa14.53□□□□□ -0.08
RITA1-201ENST00000548278 IGLL5B9A064 214 aa14.52□□□□□ -0.09
RITA1-201ENST00000548278 TMEM238C9JI98 176 aa14.52□□□□□ -0.09
RITA1-201ENST00000548278 TEX48A0A1B0GUV7 120 aa14.51□□□□□ -0.09
RITA1-201ENST00000548278 A0A1B0GUV1 79 aa14.5□□□□□ -0.09
RITA1-201ENST00000548278 DNAH3Q8TD57 4116 aa14.5□□□□□ -0.09
RITA1-201ENST00000548278 GAGE10A6NGK3 116 aa14.5□□□□□ -0.09
RITA1-201ENST00000548278 NDUFA1O15239 70 aa14.5□□□□□ -0.09
RITA1-201ENST00000548278 ANK2Q01484 3957 aa14.49□□□□□ -0.09
RITA1-201ENST00000548278 FABP2P12104 132 aa14.49□□□□□ -0.09
RITA1-201ENST00000548278 HTN3P15516 51 aa14.49□□□□□ -0.09
RITA1-201ENST00000548278 IGKV3OR2-268A0A0C4DH90 116 aa14.48□□□□□ -0.09
RITA1-201ENST00000548278 TMEM262E9PQX1 116 aa14.48□□□□□ -0.09
RITA1-201ENST00000548278 K7EP34 96 aa14.48□□□□□ -0.09
RITA1-201ENST00000548278 ADAMTSL4-AS1Q5T5F5 129 aa14.47□□□□□ -0.09
RITA1-201ENST00000548278 GTF2H5Q6ZYL4 71 aa14.47□□□□□ -0.09
RITA1-201ENST00000548278 MUSTN1Q8IVN3 82 aa14.47□□□□□ -0.09
RITA1-201ENST00000548278 CFC1BP0CG36 223 aa14.46□□□□□ -0.09
RITA1-201ENST00000548278 CFC1P0CG37 223 aa14.46□□□□□ -0.09
RITA1-201ENST00000548278 MRPL23Q16540 153 aaKnown RBP14.46□□□□□ -0.09
RITA1-201ENST00000548278 SPCS1Q9Y6A9 102 aa14.46□□□□□ -0.09
RITA1-201ENST00000548278 TIMM17BO60830 172 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 APOMO95445 188 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 SPANXDQ9BXN6 97 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 SPANXCQ9NY87 97 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 IGHV3OR16-9A0A0B4J2B5 98 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 LINC00959A0A1B0GUT2 108 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 A4D1N5 150 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 Q9H8V8 135 aa14.45□□□□□ -0.1
RITA1-201ENST00000548278 RPL24P83731 157 aaKnown RBP14.43□□□□□ -0.1
RITA1-201ENST00000548278 PGPEP1Q9NXJ5 209 aa14.43□□□□□ -0.1
RITA1-201ENST00000548278 ICOSQ9Y6W8 199 aa14.43□□□□□ -0.1
RITA1-201ENST00000548278 OCIAD2Q56VL3 154 aa14.43□□□□□ -0.1
RITA1-201ENST00000548278 SH2D6Q7Z4S9 175 aa14.43□□□□□ -0.1
RITA1-201ENST00000548278 ZNF625Q96I27 306 aaPredicted RBP14.43□□□□□ -0.1
RITA1-201ENST00000548278 C11orf68Q9H3H3 251 aaKnown RBP14.43□□□□□ -0.1
RITA1-201ENST00000548278 MIAQ16674 131 aa14.42□□□□□ -0.1
RITA1-201ENST00000548278 RNF151Q2KHN1 245 aa14.42□□□□□ -0.1
RITA1-201ENST00000548278 EIF4EBP3O60516 100 aaPredicted RBP14.41□□□□□ -0.1
RITA1-201ENST00000548278 A0A087WZ39 114 aa14.4□□□□□ -0.1
RITA1-201ENST00000548278 TSPAN13O95857 204 aa14.4□□□□□ -0.1
RITA1-201ENST00000548278 PRSS2P07478 247 aa14.4□□□□□ -0.1
RITA1-201ENST00000548278 VPS25Q9BRG1 176 aa14.4□□□□□ -0.1
RITA1-201ENST00000548278 NOTCH1P46531 2555 aa14.39□□□□□ -0.11
RITA1-201ENST00000548278 LELP1Q5T871 98 aa14.38□□□□□ -0.11
RITA1-201ENST00000548278 Q8N3U1 123 aa14.38□□□□□ -0.11
RITA1-201ENST00000548278 SS18Q15532 418 aa14.38□□□□□ -0.11
RITA1-201ENST00000548278 COX7B2Q8TF08 81 aa14.38□□□□□ -0.11
RITA1-201ENST00000548278 PRO1854Q9UHT4 67 aa14.38□□□□□ -0.11
RITA1-201ENST00000548278 A0A0B4J2C4 111 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 CIRBPQ14011 172 aaKnown RBP14.37□□□□□ -0.11
RITA1-201ENST00000548278 CLPSL2Q6UWE3 100 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 C5orf38Q86SI9 138 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.37□□□□□ -0.11
RITA1-201ENST00000548278 Q6ZTC4 211 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 LINC00269Q8N2A0 174 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 TENM3Q9P273 2699 aa14.37□□□□□ -0.11
RITA1-201ENST00000548278 HERV-K104P63124 156 aa14.36□□□□□ -0.11
RITA1-201ENST00000548278 DAND5Q8N907 189 aa14.36□□□□□ -0.11
RITA1-201ENST00000548278 A0A0J9YWU9 116 aa14.35□□□□□ -0.11
RITA1-201ENST00000548278 H3BNG1 76 aa14.35□□□□□ -0.11
RITA1-201ENST00000548278 K7ERU9 68 aa14.35□□□□□ -0.11
RITA1-201ENST00000548278 IFITM1P13164 125 aa14.35□□□□□ -0.11
RITA1-201ENST00000548278 XCL1P47992 114 aa14.35□□□□□ -0.11
RITA1-201ENST00000548278 PRB2P02812 416 aaPredicted RBP14.34□□□□□ -0.11
RITA1-201ENST00000548278 NPC2P61916 151 aa14.34□□□□□ -0.11
RITA1-201ENST00000548278 ANGP03950 147 aaKnown RBP14.34□□□□□ -0.11
RITA1-201ENST00000548278 LYPD5Q6UWN5 251 aa14.34□□□□□ -0.11
RITA1-201ENST00000548278 IGHV3-33P01772 117 aa14.33□□□□□ -0.12
RITA1-201ENST00000548278 TOMM7Q9P0U1 55 aa14.33□□□□□ -0.12
RITA1-201ENST00000548278 REG3AQ06141 175 aa14.32□□□□□ -0.12
RITA1-201ENST00000548278 KPRPQ5T749 579 aaPredicted RBP14.32□□□□□ -0.12
RITA1-201ENST00000548278 MEIG1Q5JSS6 88 aa14.31□□□□□ -0.12
RITA1-201ENST00000548278 LINC00308Q8TCZ7 52 aa14.31□□□□□ -0.12
RITA1-201ENST00000548278 NBEAL1Q6ZS30 2694 aa14.31□□□□□ -0.12
RITA1-201ENST00000548278 A0A0U1RRA0 63 aa14.3□□□□□ -0.12
RITA1-201ENST00000548278 SFTA2Q6UW10 78 aa14.3□□□□□ -0.12
RITA1-201ENST00000548278 K7EIL1 84 aa14.3□□□□□ -0.12
RITA1-201ENST00000548278 NANOS2P60321 138 aaKnown RBP14.3□□□□□ -0.12
RITA1-201ENST00000548278 LINC01561Q8N1V8 128 aa14.3□□□□□ -0.12
RITA1-201ENST00000548278 CD164L2Q6UWJ8 174 aa14.29□□□□□ -0.12
RITA1-201ENST00000548278 CHCHD10Q8WYQ3 142 aaPredicted RBP14.29□□□□□ -0.12
RITA1-201ENST00000548278 LOC107984156A0A0G2JMH3 177 aa14.29□□□□□ -0.12
RITA1-201ENST00000548278 ARL17AQ8IVW1 177 aa14.29□□□□□ -0.12
RITA1-201ENST00000548278 C11orf45Q8TAV5 145 aa14.29□□□□□ -0.12
RITA1-201ENST00000548278 ERG28Q9UKR5 140 aa14.29□□□□□ -0.12
RITA1-201ENST00000548278 H3BMG7 143 aa14.28□□□□□ -0.12
RITA1-201ENST00000548278 SOSTDC1Q6X4U4 206 aa14.27□□□□□ -0.12
RITA1-201ENST00000548278 SPATA25Q9BR10 227 aa14.26□□□□□ -0.13
RITA1-201ENST00000548278 TM2D3Q9BRN9 247 aa14.26□□□□□ -0.13
RITA1-201ENST00000548278 IGLV10-54A0A075B6I4 117 aa14.26□□□□□ -0.13
RITA1-201ENST00000548278 H7C2G1 150 aa14.25□□□□□ -0.13
RITA1-201ENST00000548278 LYRM7Q5U5X0 104 aa14.25□□□□□ -0.13
RITA1-201ENST00000548278 COPS9Q8WXC6 57 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms