RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 Q6ZRN7 208 aaPredicted RBP4.23□□□□□ -1.73
PRKDC-211ENST00000546304 RMI2Q96E14 147 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 TMEM101Q96IK0 257 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 SPANXA1Q9NS26 97 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 CYSLTR1Q9Y271 337 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 IGKV2D-24A0A075B6R9 120 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 IGKV3OR2-268A0A0C4DH90 116 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 ENHOQ6UWT2 76 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 LINC00336Q6ZUF6 198 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 CSDC2Q9Y534 153 aaKnown RBP4.22□□□□□ -1.73
PRKDC-211ENST00000546304 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
PRKDC-211ENST00000546304 IGLV10-54A0A075B6I4 117 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 PCP4L1A6NKN8 68 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 PSCAO43653 123 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 G0S2P27469 103 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 RAB5BP61020 215 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 MRPS36P82909 103 aaKnown RBP4.21□□□□□ -1.74
PRKDC-211ENST00000546304 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
PRKDC-211ENST00000546304 ZNF664Q8N3J9 261 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 TM2D2Q9BX73 214 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
PRKDC-211ENST00000546304 A0A096LNJ9 63 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 TRAV8-4A0A0B4J246 113 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 C5orf52A6NGY3 159 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 LINC01549A6NIU2 74 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 IFITM10A6NMD0 228 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BKO60814 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HBDP02042 147 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 S100A6P06703 90 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BJP06899 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 LINC00614P0C842 121 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BOP23527 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BBP33778 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BDP58876 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BCP62807 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST2H2BEQ16778 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.2□□□□□ -1.74
PRKDC-211ENST00000546304 Q6ZN92 141 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 BAGE3Q86Y29 109 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BHQ93079 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 CHCHD1Q96BP2 118 aaKnown RBP4.2□□□□□ -1.74
PRKDC-211ENST00000546304 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BNQ99877 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 HIST1H2BMQ99879 126 aa4.2□□□□□ -1.74
PRKDC-211ENST00000546304 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
PRKDC-211ENST00000546304 DNAH8Q96JB1 4490 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 TRAV13-1A0A0B4J241 112 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 HSBP1O75506 76 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 SERF1AO75920 110 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 XCL1P47992 114 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 TEX43Q6ZNM6 134 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 LINC00173Q6ZV60 143 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 ERASQ7Z444 233 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
PRKDC-211ENST00000546304 SCGB3A1Q96QR1 104 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 OPRPNQ99935 248 aaPredicted RBP4.19□□□□□ -1.74
PRKDC-211ENST00000546304 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
PRKDC-211ENST00000546304 KIAA1109Q2LD37 5005 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 A0A087WTM6 91 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 KRTAP29-1A8MX34 341 aaPredicted RBP4.18□□□□□ -1.74
PRKDC-211ENST00000546304 C1orf196B1AJZ1 125 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 HSBP1L1C9JCN9 74 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 LECT2O14960 151 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 CCL25O15444 150 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 WFDC2Q14508 124 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 SS18Q15532 418 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
PRKDC-211ENST00000546304 RYR1P21817 5038 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 LRCOL1A6NCL2 159 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.17□□□□□ -1.74
PRKDC-211ENST00000546304 ATP5LO75964 103 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 UBE2D1P51668 147 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 PDZD11Q5EBL8 140 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 ZC2HC1BQ5TFG8 222 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 BAALCQ8WXS3 180 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 AMELXQ99217 191 aa4.17□□□□□ -1.74
PRKDC-211ENST00000546304 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
PRKDC-211ENST00000546304 C14orf177Q52M58 125 aa4.16□□□□□ -1.74
PRKDC-211ENST00000546304 FAM19A2Q8N3H0 131 aa4.16□□□□□ -1.74
PRKDC-211ENST00000546304 Q8N814 137 aa4.16□□□□□ -1.74
PRKDC-211ENST00000546304 IGHV3OR16-9A0A0B4J2B5 98 aa4.15□□□□□ -1.75
PRKDC-211ENST00000546304 COX7A2LO14548 114 aa4.15□□□□□ -1.75
PRKDC-211ENST00000546304 NUPR1O60356 82 aa4.15□□□□□ -1.75
PRKDC-211ENST00000546304 PMVKQ15126 192 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms