RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 HIST1H2BKO60814 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 SERF1AO75920 110 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BJP06899 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BOP23527 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BBP33778 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BDP58876 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BCP62807 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 COX6A2Q02221 97 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST2H2BEQ16778 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-211ENST00000546215 FAM19A3Q7Z5A8 133 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BHQ93079 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BNQ99877 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HIST1H2BMQ99879 126 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 HSBP1O75506 76 aa13.54□□□□□ -0.24
SCARB1-211ENST00000546215 IGHV1-58A0A0C4DH39 117 aa13.54□□□□□ -0.24
SCARB1-211ENST00000546215 FAM19A2Q8N3H0 131 aa13.54□□□□□ -0.24
SCARB1-211ENST00000546215 CST9LQ9H4G1 147 aa13.54□□□□□ -0.24
SCARB1-211ENST00000546215 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-211ENST00000546215 NUPR1O60356 82 aa13.53□□□□□ -0.24
SCARB1-211ENST00000546215 GCSHP23434 173 aa13.53□□□□□ -0.24
SCARB1-211ENST00000546215 ATP5LO75964 103 aa13.52□□□□□ -0.25
SCARB1-211ENST00000546215 MALP21145 153 aa13.52□□□□□ -0.25
SCARB1-211ENST00000546215 PMVKQ15126 192 aa13.52□□□□□ -0.25
SCARB1-211ENST00000546215 HIGD2BQ4VC39 106 aa13.52□□□□□ -0.25
SCARB1-211ENST00000546215 DNAH8Q96JB1 4490 aa13.51□□□□□ -0.25
SCARB1-211ENST00000546215 SLPIP03973 132 aa13.51□□□□□ -0.25
SCARB1-211ENST00000546215 KRTAP10-1P60331 282 aa13.5□□□□□ -0.25
SCARB1-211ENST00000546215 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
SCARB1-211ENST00000546215 A0A087WZ39 114 aa13.49□□□□□ -0.25
SCARB1-211ENST00000546215 CNBPP62633 177 aaKnown RBP13.49□□□□□ -0.25
SCARB1-211ENST00000546215 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
SCARB1-211ENST00000546215 SEC11AP67812 179 aa13.49□□□□□ -0.25
SCARB1-211ENST00000546215 KIAA1109Q2LD37 5005 aa13.48□□□□□ -0.25
SCARB1-211ENST00000546215 APOMO95445 188 aa13.48□□□□□ -0.25
SCARB1-211ENST00000546215 HERVK_113P63121 156 aa13.48□□□□□ -0.25
SCARB1-211ENST00000546215 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
SCARB1-211ENST00000546215 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
SCARB1-211ENST00000546215 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.25
SCARB1-211ENST00000546215 TINCRA0A1B0GVN0 87 aa13.46□□□□□ -0.25
SCARB1-211ENST00000546215 NDUFA6P56556 154 aa13.46□□□□□ -0.25
SCARB1-211ENST00000546215 C9orf163Q8N9P6 203 aa13.46□□□□□ -0.25
SCARB1-211ENST00000546215 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.25
SCARB1-211ENST00000546215 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
SCARB1-211ENST00000546215 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
SCARB1-211ENST00000546215 LINC01561Q8N1V8 128 aa13.45□□□□□ -0.26
SCARB1-211ENST00000546215 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
SCARB1-211ENST00000546215 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
SCARB1-211ENST00000546215 ORAOV1Q8WV07 137 aa13.44□□□□□ -0.26
SCARB1-211ENST00000546215 RYR1P21817 5038 aa13.44□□□□□ -0.26
SCARB1-211ENST00000546215 IGLV4-69A0A075B6H9 119 aa13.43□□□□□ -0.26
SCARB1-211ENST00000546215 IGLV5-45A0A087WSX0 123 aa13.43□□□□□ -0.26
SCARB1-211ENST00000546215 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-211ENST00000546215 LEPROTL1O95214 131 aa13.43□□□□□ -0.26
SCARB1-211ENST00000546215 SPAG11BQ08648 103 aa13.42□□□□□ -0.26
SCARB1-211ENST00000546215 COA6Q5JTJ3 125 aaKnown RBP13.42□□□□□ -0.26
SCARB1-211ENST00000546215 HSPG2P98160 4391 aa13.42□□□□□ -0.26
SCARB1-211ENST00000546215 IGLC3P0DOY3 106 aa13.41□□□□□ -0.26
SCARB1-211ENST00000546215 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
SCARB1-211ENST00000546215 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
SCARB1-211ENST00000546215 TRAV12-1A0A0B4J245 112 aa13.4□□□□□ -0.26
SCARB1-211ENST00000546215 FABP4P15090 132 aa13.4□□□□□ -0.26
SCARB1-211ENST00000546215 FAM30AQ9NZY2 134 aa13.4□□□□□ -0.26
SCARB1-211ENST00000546215 HSPB8Q9UJY1 196 aa13.4□□□□□ -0.26
SCARB1-211ENST00000546215 CDK2AP2O75956 126 aa13.39□□□□□ -0.27
SCARB1-211ENST00000546215 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
SCARB1-211ENST00000546215 KIAA0087Q14695 138 aa13.39□□□□□ -0.27
SCARB1-211ENST00000546215 SDIM1Q6ZPB5 146 aa13.38□□□□□ -0.27
SCARB1-211ENST00000546215 Q6ZSA8 131 aa13.38□□□□□ -0.27
SCARB1-211ENST00000546215 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
SCARB1-211ENST00000546215 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
SCARB1-211ENST00000546215 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
SCARB1-211ENST00000546215 CAMK2N2Q96S95 79 aa13.37□□□□□ -0.27
SCARB1-211ENST00000546215 Q6ZRU5 148 aa13.37□□□□□ -0.27
SCARB1-211ENST00000546215 PACRGQ96M98 296 aaPredicted RBP13.37□□□□□ -0.27
SCARB1-211ENST00000546215 C11orf86A6NJI1 115 aa13.36□□□□□ -0.27
SCARB1-211ENST00000546215 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SCARB1-211ENST00000546215 XGP55808 180 aa13.36□□□□□ -0.27
SCARB1-211ENST00000546215 F8WDY8 70 aa13.35□□□□□ -0.27
SCARB1-211ENST00000546215 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
SCARB1-211ENST00000546215 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
SCARB1-211ENST00000546215 F8VRH5 84 aa13.34□□□□□ -0.27
SCARB1-211ENST00000546215 H0Y8G0 127 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 H3BRM9 83 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 SPINK8P0C7L1 97 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 ODF1Q14990 250 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 Q8IZM0 81 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
SCARB1-211ENST00000546215 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
SCARB1-211ENST00000546215 NDUFA1O15239 70 aa13.32□□□□□ -0.28
SCARB1-211ENST00000546215 UNQ6190/PRO20217Q6UXQ8 127 aa13.32□□□□□ -0.28
SCARB1-211ENST00000546215 HERC2O95714 4834 aa13.32□□□□□ -0.28
SCARB1-211ENST00000546215 PRSS2P07478 247 aa13.31□□□□□ -0.28
SCARB1-211ENST00000546215 C6orf226Q5I0X4 101 aa13.31□□□□□ -0.28
SCARB1-211ENST00000546215 C2orf82Q6UX34 121 aa13.31□□□□□ -0.28
SCARB1-211ENST00000546215 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
SCARB1-211ENST00000546215 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
SCARB1-211ENST00000546215 TMEM170BQ5T4T1 132 aa13.3□□□□□ -0.28
SCARB1-211ENST00000546215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms