RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IL17DQ8TAD2 202 aa10.08□□□□□ -0.8
SRP54-202ENST00000546080 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
SRP54-202ENST00000546080 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
SRP54-202ENST00000546080 J3KT08 172 aa10.08□□□□□ -0.8
SRP54-202ENST00000546080 LINC00158P58513 81 aa10.08□□□□□ -0.8
SRP54-202ENST00000546080 H0YGX0 51 aa10.07□□□□□ -0.8
SRP54-202ENST00000546080 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
SRP54-202ENST00000546080 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
SRP54-202ENST00000546080 LRRC75A-AS1Q8N1F1 130 aa10.07□□□□□ -0.8
SRP54-202ENST00000546080 A0A1B0GX51 115 aa10.07□□□□□ -0.8
SRP54-202ENST00000546080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.87e-8■■■■■ 26.8
SRP54-202ENST00000546080 Q6ZTI0 123 aa10.07□□□□□ -0.8
SRP54-202ENST00000546080 C1orf158Q8N1D5 194 aa10.07□□□□□ -0.8
SRP54-202ENST00000546080 IGKV3D-7A0A0C4DH55 119 aa10.06□□□□□ -0.8
SRP54-202ENST00000546080 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
SRP54-202ENST00000546080 KHDC1LQ5JSQ8 128 aa10.06□□□□□ -0.8
SRP54-202ENST00000546080 Q6JHZ5 121 aa10.06□□□□□ -0.8
SRP54-202ENST00000546080 STHQ8IWL8 128 aa10.06□□□□□ -0.8
SRP54-202ENST00000546080 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
SRP54-202ENST00000546080 Q6YL49 198 aa10.05□□□□□ -0.8
SRP54-202ENST00000546080 J3QLI3 93 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 LECT2O14960 151 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 CCL18P55774 89 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 DSCR9P59020 149 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 C4orf3Q8WVX3 66 aa10.04□□□□□ -0.8
SRP54-202ENST00000546080 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
SRP54-202ENST00000546080 MAPK1IP1LQ8NDC0 245 aa10.02□□□□□ -0.8
SRP54-202ENST00000546080 NCR3O14931 201 aa10.02□□□□□ -0.81
SRP54-202ENST00000546080 IBA57-AS1B1ANH7 110 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 OR13C6PQ8NH95 151 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 A0A087WVE0 104 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 PAX4O43316 350 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 PFN2P35080 140 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
SRP54-202ENST00000546080 SERP2Q8N6R1 65 aa10.01□□□□□ -0.81
SRP54-202ENST00000546080 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
SRP54-202ENST00000546080 FAM208BQ5VWN6 2430 aa10□□□□□ -0.81
SRP54-202ENST00000546080 SLPIP03973 132 aa9.99□□□□□ -0.81
SRP54-202ENST00000546080 RPS28P62857 69 aaKnown RBP9.99□□□□□ -0.81
SRP54-202ENST00000546080 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
SRP54-202ENST00000546080 FLNCQ14315 2725 aa9.99□□□□□ -0.81
SRP54-202ENST00000546080 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
SRP54-202ENST00000546080 MYO18BQ8IUG5 2567 aa9.99□□□□□ -0.81
SRP54-202ENST00000546080 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 ZNF462Q96JM2 2506 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 IGLV4-60A0A075B6I1 120 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 TRGV2A0A075B6R0 118 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 TMEM258P61165 79 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
SRP54-202ENST00000546080 A0A096LNT2 108 aa9.97□□□□□ -0.81
SRP54-202ENST00000546080 FSHBP01225 129 aa9.97□□□□□ -0.81
SRP54-202ENST00000546080 A0A087WZ39 114 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 TRAV25A0A0B4J276 109 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 CELSR2Q9HCU4 2923 aa9.96□□□□□ -0.82
SRP54-202ENST00000546080 CCKP06307 115 aa9.95□□□□□ -0.82
SRP54-202ENST00000546080 C11orf68Q9H3H3 251 aaKnown RBP9.95□□□□□ -0.82
SRP54-202ENST00000546080 CREBBPQ92793 2442 aa9.95□□□□□ -0.82
SRP54-202ENST00000546080 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
SRP54-202ENST00000546080 LY6G6DO95868 133 aa9.95□□□□□ -0.82
SRP54-202ENST00000546080 BBC3Q96PG8 261 aaPredicted RBP9.95□□□□□ -0.82
SRP54-202ENST00000546080 C16orf74Q96GX8 76 aa9.94□□□□□ -0.82
SRP54-202ENST00000546080 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
SRP54-202ENST00000546080 SS18Q15532 418 aa9.93□□□□□ -0.82
SRP54-202ENST00000546080 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
SRP54-202ENST00000546080 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
SRP54-202ENST00000546080 KIR2DL5BQ8NHK3 375 aa9.93□□□□□ -0.82
SRP54-202ENST00000546080 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
SRP54-202ENST00000546080 MAP1AP78559 2803 aaPredicted RBP9.92□□□□□ -0.82
SRP54-202ENST00000546080 JMJD7-PLA2G4BH0Y9G9 81 aa9.92□□□□□ -0.82
SRP54-202ENST00000546080 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
SRP54-202ENST00000546080 TMEM86BQ8N661 226 aa9.91□□□□□ -0.82
SRP54-202ENST00000546080 IGHV4-31P0DP07 118 aa9.91□□□□□ -0.82
SRP54-202ENST00000546080 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
SRP54-202ENST00000546080 PRB1P04280 392 aa9.9□□□□□ -0.82
SRP54-202ENST00000546080 ATP5EP2Q5VTU8 51 aa9.9□□□□□ -0.82
SRP54-202ENST00000546080 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
SRP54-202ENST00000546080 A0A1W2PRX2 142 aa9.89□□□□□ -0.83
SRP54-202ENST00000546080 HILS1P60008 231 aa9.89□□□□□ -0.83
SRP54-202ENST00000546080 DSCR8Q96T75 97 aa9.89□□□□□ -0.83
SRP54-202ENST00000546080 UBR5O95071 2799 aaPredicted RBP9.89□□□□□ -0.83
SRP54-202ENST00000546080 CSMD2Q7Z408 3487 aa9.89□□□□□ -0.83
SRP54-202ENST00000546080 TMEM256-PLSCR3K7ERE1 68 aa9.88□□□□□ -0.83
SRP54-202ENST00000546080 GIG44P09565 113 aaPredicted RBP9.88□□□□□ -0.83
SRP54-202ENST00000546080 Q8N814 137 aa9.88□□□□□ -0.83
SRP54-202ENST00000546080 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
SRP54-202ENST00000546080 USP9XQ93008 2570 aaPredicted RBP9.88□□□□□ -0.83
SRP54-202ENST00000546080 GHRHP01286 108 aa9.88□□□□□ -0.83
SRP54-202ENST00000546080 XCL1P47992 114 aa9.87□□□□□ -0.83
SRP54-202ENST00000546080 C11orf44Q8N8P7 122 aa9.87□□□□□ -0.83
SRP54-202ENST00000546080 WFDC9Q8NEX5 89 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms