RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
CPSF7-225ENST00000545934 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
CPSF7-225ENST00000545934 A0A0U1RQV1 116 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
CPSF7-225ENST00000545934 RPL32P62910 135 aaKnown RBP9.93□□□□□ -0.82
CPSF7-225ENST00000545934 RIGQ13278 110 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 KIAA0087Q14695 138 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-225ENST00000545934 TCTE3Q8IZS6 198 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 C20orf78Q9BR46 151 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 CARHSP1Q9Y2V2 147 aaKnown RBP9.93□□□□□ -0.82
CPSF7-225ENST00000545934 V9GYV3 84 aa9.93□□□□□ -0.82
CPSF7-225ENST00000545934 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
CPSF7-225ENST00000545934 M0QXV9 152 aa9.92□□□□□ -0.82
CPSF7-225ENST00000545934 UBE2D1P51668 147 aa9.92□□□□□ -0.82
CPSF7-225ENST00000545934 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
CPSF7-225ENST00000545934 MRPL51Q4U2R6 128 aaKnown RBP9.92□□□□□ -0.82
CPSF7-225ENST00000545934 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
CPSF7-225ENST00000545934 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
CPSF7-225ENST00000545934 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
CPSF7-225ENST00000545934 SMIM7Q9BQ49 75 aa9.91□□□□□ -0.82
CPSF7-225ENST00000545934 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
CPSF7-225ENST00000545934 MUC17Q685J3 4493 aa9.91□□□□□ -0.82
CPSF7-225ENST00000545934 LINC00862A6NCI5 91 aa9.9□□□□□ -0.82
CPSF7-225ENST00000545934 CEBPGP53567 150 aa9.9□□□□□ -0.82
CPSF7-225ENST00000545934 UBE2BP63146 152 aa9.9□□□□□ -0.82
CPSF7-225ENST00000545934 TCAPO15273 167 aa9.89□□□□□ -0.83
CPSF7-225ENST00000545934 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
CPSF7-225ENST00000545934 C9orf129Q5T035 196 aaKnown RBP9.89□□□□□ -0.83
CPSF7-225ENST00000545934 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
CPSF7-225ENST00000545934 HBBP68871 147 aa9.88□□□□□ -0.83
CPSF7-225ENST00000545934 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 NDUFC2-KCTD14E9PQ53 114 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 ZNF861PO60384 105 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
CPSF7-225ENST00000545934 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
CPSF7-225ENST00000545934 ALKAL2Q6UX46 152 aa9.86□□□□□ -0.83
CPSF7-225ENST00000545934 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
CPSF7-225ENST00000545934 SRP19P09132 144 aaKnown RBP9.85□□□□□ -0.83
CPSF7-225ENST00000545934 CKS2P33552 79 aa9.85□□□□□ -0.83
CPSF7-225ENST00000545934 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
CPSF7-225ENST00000545934 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
CPSF7-225ENST00000545934 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
CPSF7-225ENST00000545934 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
CPSF7-225ENST00000545934 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
CPSF7-225ENST00000545934 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
CPSF7-225ENST00000545934 A0A1B0GW15 77 aa9.82□□□□□ -0.84
CPSF7-225ENST00000545934 NUPR1O60356 82 aa9.82□□□□□ -0.84
CPSF7-225ENST00000545934 TSPAN13O95857 204 aa9.82□□□□□ -0.84
CPSF7-225ENST00000545934 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
CPSF7-225ENST00000545934 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
CPSF7-225ENST00000545934 A0A087X002 238 aa9.81□□□□□ -0.84
CPSF7-225ENST00000545934 D6R8Y8 96 aa9.81□□□□□ -0.84
CPSF7-225ENST00000545934 NPYP01303 97 aa9.81□□□□□ -0.84
CPSF7-225ENST00000545934 RPL23P62829 140 aaKnown RBP9.81□□□□□ -0.84
CPSF7-225ENST00000545934 KRTAP9-6A0A140TA67 174 aa9.8□□□□□ -0.84
CPSF7-225ENST00000545934 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-225ENST00000545934 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-225ENST00000545934 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
CPSF7-225ENST00000545934 A0A1B0GXF2 115 aa9.78□□□□□ -0.84
CPSF7-225ENST00000545934 CTDSP1Q9GZU7 261 aa9.78□□□□□ -0.84
CPSF7-225ENST00000545934 PPBPP02775 128 aa9.77□□□□□ -0.85
CPSF7-225ENST00000545934 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
CPSF7-225ENST00000545934 F8W036 122 aa9.76□□□□□ -0.85
CPSF7-225ENST00000545934 LBHQ53QV2 105 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-225ENST00000545934 ADIRFQ15847 76 aa9.75□□□□□ -0.85
CPSF7-225ENST00000545934 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
CPSF7-225ENST00000545934 LINC00469Q8N7U9 141 aa9.75□□□□□ -0.85
CPSF7-225ENST00000545934 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
CPSF7-225ENST00000545934 PRSS47A8MTI9 375 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 BCE1O60756 84 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 S100A8P05109 93 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 CRYGAP11844 174 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 MRPL54Q6P161 138 aaKnown RBP9.74□□□□□ -0.85
CPSF7-225ENST00000545934 TEX43Q6ZNM6 134 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 FAM19A3Q7Z5A8 133 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 Q8IZM0 81 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 AMELXQ99217 191 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 NAT8Q9UHE5 227 aa9.74□□□□□ -0.85
CPSF7-225ENST00000545934 C9JQL5 133 aa9.73□□□□□ -0.85
CPSF7-225ENST00000545934 RAB5AP20339 215 aa9.73□□□□□ -0.85
CPSF7-225ENST00000545934 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
CPSF7-225ENST00000545934 Q6ZN92 141 aa9.73□□□□□ -0.85
CPSF7-225ENST00000545934 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
CPSF7-225ENST00000545934 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
CPSF7-225ENST00000545934 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
CPSF7-225ENST00000545934 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
CPSF7-225ENST00000545934 PRSS2P07478 247 aa9.71□□□□□ -0.86
CPSF7-225ENST00000545934 CKS1BP61024 79 aa9.71□□□□□ -0.86
CPSF7-225ENST00000545934 PRELID3AQ96N28 172 aa9.71□□□□□ -0.86
CPSF7-225ENST00000545934 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.86
CPSF7-225ENST00000545934 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
CPSF7-225ENST00000545934 TMEM136Q6ZRR5 245 aa9.7□□□□□ -0.86
CPSF7-225ENST00000545934 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
CPSF7-225ENST00000545934 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
CPSF7-225ENST00000545934 C2orf66Q6UXQ4 117 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms