RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
CHD4-213ENST00000545584 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
CHD4-213ENST00000545584 OR10D4PQ8NGN7 298 aa12.41□□□□□ -0.42
CHD4-213ENST00000545584 OPRPNQ99935 248 aaPredicted RBP12.41□□□□□ -0.42
CHD4-213ENST00000545584 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
CHD4-213ENST00000545584 Q6ZRP5 223 aa12.4□□□□□ -0.42
CHD4-213ENST00000545584 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.42
CHD4-213ENST00000545584 MT-ND4LP03901 98 aa12.39□□□□□ -0.43
CHD4-213ENST00000545584 RPL18AQ02543 176 aaKnown RBP12.39□□□□□ -0.43
CHD4-213ENST00000545584 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
CHD4-213ENST00000545584 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 F8WDY8 70 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 RNF151Q2KHN1 245 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 FAM104AQ969W3 186 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 LAMTOR2Q9Y2Q5 125 aa12.38□□□□□ -0.43
CHD4-213ENST00000545584 TGIF2-C20orf24A0A0A6YYL0 155 aa12.37□□□□□ -0.43
CHD4-213ENST00000545584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.37□□□□□ -0.43
CHD4-213ENST00000545584 MAP1LC3AQ9H492 121 aa12.37□□□□□ -0.43
CHD4-213ENST00000545584 LOC389332A0A1B0GUA5 103 aa12.36□□□□□ -0.43
CHD4-213ENST00000545584 NDUFA1O15239 70 aa12.36□□□□□ -0.43
CHD4-213ENST00000545584 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
CHD4-213ENST00000545584 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
CHD4-213ENST00000545584 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
CHD4-213ENST00000545584 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
CHD4-213ENST00000545584 C9orf116Q5BN46 136 aaPredicted RBP12.35□□□□□ -0.43
CHD4-213ENST00000545584 REG3GQ6UW15 175 aa12.35□□□□□ -0.43
CHD4-213ENST00000545584 LINC01600Q96MT4 127 aa12.35□□□□□ -0.43
CHD4-213ENST00000545584 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
CHD4-213ENST00000545584 PRSS47A8MTI9 375 aa12.34□□□□□ -0.43
CHD4-213ENST00000545584 CLLU1Q5K131 121 aa12.34□□□□□ -0.43
CHD4-213ENST00000545584 TMEM141Q96I45 108 aa12.34□□□□□ -0.43
CHD4-213ENST00000545584 IGLV4-3A0A075B6K6 122 aa12.32□□□□□ -0.44
CHD4-213ENST00000545584 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
CHD4-213ENST00000545584 Q8N8P6 123 aa12.32□□□□□ -0.44
CHD4-213ENST00000545584 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHD4-213ENST00000545584 Q6ZN92 141 aa12.31□□□□□ -0.44
CHD4-213ENST00000545584 C2orf88Q9BSF0 95 aa12.31□□□□□ -0.44
CHD4-213ENST00000545584 CYSLTR1Q9Y271 337 aa12.31□□□□□ -0.44
CHD4-213ENST00000545584 A0A087WZ39 114 aa12.3□□□□□ -0.44
CHD4-213ENST00000545584 MT-ND6P03923 174 aa12.3□□□□□ -0.44
CHD4-213ENST00000545584 IFITM2Q01629 132 aa12.3□□□□□ -0.44
CHD4-213ENST00000545584 LINC00242Q5T6M2 205 aa12.3□□□□□ -0.44
CHD4-213ENST00000545584 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
CHD4-213ENST00000545584 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
CHD4-213ENST00000545584 UNQ6190/PRO20217Q6UXQ8 127 aa12.29□□□□□ -0.44
CHD4-213ENST00000545584 CTDSP1Q9GZU7 261 aa12.29□□□□□ -0.44
CHD4-213ENST00000545584 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
CHD4-213ENST00000545584 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
CHD4-213ENST00000545584 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
CHD4-213ENST00000545584 HMCN2Q8NDA2 5059 aa12.27□□□□□ -0.45
CHD4-213ENST00000545584 K7EMI3 77 aa12.27□□□□□ -0.45
CHD4-213ENST00000545584 VCX2Q9H322 139 aa12.27□□□□□ -0.45
CHD4-213ENST00000545584 C6orf48Q9UBA6 75 aa12.27□□□□□ -0.45
CHD4-213ENST00000545584 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.45
CHD4-213ENST00000545584 ADCYAP1P18509 176 aa12.26□□□□□ -0.45
CHD4-213ENST00000545584 UBE2D1P51668 147 aa12.26□□□□□ -0.45
CHD4-213ENST00000545584 NXT2Q9NPJ8 142 aaKnown RBP12.26□□□□□ -0.45
CHD4-213ENST00000545584 G0S2P27469 103 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 KIAA0087Q14695 138 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 GAGE2EQ4V326 116 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 LINC01561Q8N1V8 128 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 PACRGQ96M98 296 aaPredicted RBP12.25□□□□□ -0.45
CHD4-213ENST00000545584 GAGE2DQ9UEU5 116 aa12.25□□□□□ -0.45
CHD4-213ENST00000545584 TRBV30A0A0K0K1B3 111 aa12.24□□□□□ -0.45
CHD4-213ENST00000545584 NPSP0C0P6 89 aa12.24□□□□□ -0.45
CHD4-213ENST00000545584 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
CHD4-213ENST00000545584 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
CHD4-213ENST00000545584 AMELXQ99217 191 aa12.23□□□□□ -0.45
CHD4-213ENST00000545584 TMEM218A2RU14 115 aa12.22□□□□□ -0.45
CHD4-213ENST00000545584 PRSS2P07478 247 aa12.22□□□□□ -0.45
CHD4-213ENST00000545584 KRTAP10-8P60410 259 aa12.22□□□□□ -0.45
CHD4-213ENST00000545584 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
CHD4-213ENST00000545584 FAM168BA1KXE4 195 aa12.21□□□□□ -0.45
CHD4-213ENST00000545584 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
CHD4-213ENST00000545584 C2orf82Q6UX34 121 aa12.21□□□□□ -0.45
CHD4-213ENST00000545584 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.45
CHD4-213ENST00000545584 FAM19A5Q7Z5A7 132 aaPredicted RBP12.21□□□□□ -0.45
CHD4-213ENST00000545584 SEC11AP67812 179 aa12.2□□□□□ -0.46
CHD4-213ENST00000545584 TRAV9-1A0A075B6T8 112 aa12.19□□□□□ -0.46
CHD4-213ENST00000545584 NDUFC2-KCTD14E9PQ53 114 aa12.19□□□□□ -0.46
CHD4-213ENST00000545584 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
CHD4-213ENST00000545584 CKS1BP61024 79 aa12.18□□□□□ -0.46
CHD4-213ENST00000545584 HERVK_113P63121 156 aa12.18□□□□□ -0.46
CHD4-213ENST00000545584 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
CHD4-213ENST00000545584 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
CHD4-213ENST00000545584 IGLV7-43P04211 117 aa12.17□□□□□ -0.46
CHD4-213ENST00000545584 FAM19A3Q7Z5A8 133 aa12.17□□□□□ -0.46
CHD4-213ENST00000545584 DIRC1Q969H9 104 aa12.17□□□□□ -0.46
CHD4-213ENST00000545584 TIMM17AQ99595 171 aa12.17□□□□□ -0.46
CHD4-213ENST00000545584 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
CHD4-213ENST00000545584 M0QXV9 152 aa12.16□□□□□ -0.46
CHD4-213ENST00000545584 S100PP25815 95 aa12.16□□□□□ -0.46
CHD4-213ENST00000545584 UBE2BP63146 152 aa12.16□□□□□ -0.46
CHD4-213ENST00000545584 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
CHD4-213ENST00000545584 ALKBH7Q9BT30 221 aaPredicted RBP12.16□□□□□ -0.46
CHD4-213ENST00000545584 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
CHD4-213ENST00000545584 Q8IZM0 81 aa12.15□□□□□ -0.46
CHD4-213ENST00000545584 TOMM6Q96B49 74 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms