RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SNRPGP15A8MWD9 76 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 M0R129 80 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 NDUFC2O95298 119 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 IFNA1P01562 189 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 IFNA7P01567 189 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 HTN1P15515 57 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 HIST1H1DP16402 221 aaKnown RBP1.86□□□□□ -2.11
SNHG1-222ENST00000545308 RPS25P62851 125 aaKnown RBP1.86□□□□□ -2.11
SNHG1-222ENST00000545308 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
SNHG1-222ENST00000545308 QRFPP83859 136 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 AKR1C8PQ5T2L2 129 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 LYPD5Q6UWN5 251 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 Q6ZSA8 131 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 GOLT1AQ6ZVE7 132 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 OR8I2Q8N0Y5 310 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 SLC35B3Q9H1N7 401 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 CST9LQ9H4G1 147 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 NOP10Q9NPE3 64 aaKnown RBP1.86□□□□□ -2.11
SNHG1-222ENST00000545308 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 CYSLTR1Q9Y271 337 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 IGHV3-64A0A075B6Q5 118 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 A0A0G2JQZ4 141 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 CRYM-AS1A6NIL9 109 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 A8MTW9 85 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 IBA57-AS1B1ANH7 110 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 GABARAPH6UMI1 98 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 PFDN1O60925 122 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 PPYP01298 95 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 SRIP30626 198 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 GNG2P59768 71 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 TPRXLQ17RH7 258 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 MIR17HGQ75NE6 70 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 HIST3H2BBQ8N257 126 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 Q8NDZ9 215 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 DPH3Q96FX2 82 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 MRPL32Q9BYC8 188 aaKnown RBP1.85□□□□□ -2.11
SNHG1-222ENST00000545308 C8orf4Q9NR00 106 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 OSTCQ9NRP0 149 aa1.85□□□□□ -2.11
SNHG1-222ENST00000545308 HMCN2Q8NDA2 5059 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 TMSB15BA0A087X1C1 80 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 PIGBOS1A0A0B4J2F0 54 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 GPR31O00270 319 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 PGLYRP1O75594 196 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-222ENST00000545308 METTL15P1P0C7V9 234 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 G6PCP35575 357 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 SPINK13Q1W4C9 94 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 GDF5OSQ5U4N7 250 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 XAF1Q6GPH4 301 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 Q6Q795 121 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 ATP6V0E2Q8NHE4 81 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 C2orf50Q96LR7 162 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 ATG5Q9H1Y0 275 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 VCX3BQ9H321 246 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 SSR3Q9UNL2 185 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 U3KQ87 197 aa1.84□□□□□ -2.11
SNHG1-222ENST00000545308 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 PNMA8CA0A1B0GUJ8 204 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 A0A1B0GVG6 124 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 TMEM238C9JI98 176 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 H3BRN7 92 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 M0R2Z0 102 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 PITX3O75364 302 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 CRYBA4P53673 196 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 FXYD4P59646 89 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 EIF5AP63241 154 aaKnown RBP1.83□□□□□ -2.12
SNHG1-222ENST00000545308 HAMPP81172 84 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 LRP2P98164 4655 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 ELOBQ15370 118 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 LINC01556Q5JQF7 62 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 ZNF818PQ6ZRF7 136 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 SMIM15Q7Z3B0 74 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-222ENST00000545308 MAFIPQ8WZ33 124 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 PRRT1Q99946 306 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 FAM107BQ9H098 131 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 BIN3Q9NQY0 253 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 SCN3BQ9NY72 215 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
SNHG1-222ENST00000545308 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
SNHG1-222ENST00000545308 TRAV12-2A0A075B6T6 113 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 TRBV10-2A0A0K0K1G8 114 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 A0A1B0GV72 72 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 MEIS3P1A6NDR6 274 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 IFITM5A6NNB3 132 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 SLC25A5P05141 298 aaKnown RBP1.82□□□□□ -2.12
SNHG1-222ENST00000545308 IGLC1P0CG04 106 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 RPL7P18124 248 aaKnown RBP1.82□□□□□ -2.12
SNHG1-222ENST00000545308 ZNF80P51504 273 aaPredicted RBP1.82□□□□□ -2.12
SNHG1-222ENST00000545308 PIGPP57054 158 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 Q0VG73 95 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 SPCS2Q15005 226 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 Q6ZTI0 123 aa1.82□□□□□ -2.12
SNHG1-222ENST00000545308 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms