RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 SIGMAR1Q99720 223 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 NF1P21359 2839 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 SLC25A20O43772 301 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
SCARB1-208ENST00000544327 LINC00308Q8TCZ7 52 aa12.47□□□□□ -0.41
SCARB1-208ENST00000544327 C9JAW5 83 aa12.46□□□□□ -0.41
SCARB1-208ENST00000544327 SCGB1A1P11684 91 aa12.46□□□□□ -0.41
SCARB1-208ENST00000544327 LINC01620Q4KN68 170 aa12.46□□□□□ -0.41
SCARB1-208ENST00000544327 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.41
SCARB1-208ENST00000544327 SMIM9A6NGZ8 99 aa12.46□□□□□ -0.42
SCARB1-208ENST00000544327 NPC2P61916 151 aa12.46□□□□□ -0.42
SCARB1-208ENST00000544327 CFAP161Q6P656 301 aa12.46□□□□□ -0.42
SCARB1-208ENST00000544327 ACANP16112 2415 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 CRLF1O75462 422 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 COX6CP09669 75 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 DAND5Q8N907 189 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
SCARB1-208ENST00000544327 RPL13AP40429 203 aaKnown RBP12.44□□□□□ -0.42
SCARB1-208ENST00000544327 GAGE6Q13070 117 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 X6R8D5 127 aa12.44□□□□□ -0.42
SCARB1-208ENST00000544327 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
SCARB1-208ENST00000544327 C9orf66Q5T8R8 295 aa12.42□□□□□ -0.42
SCARB1-208ENST00000544327 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
SCARB1-208ENST00000544327 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
SCARB1-208ENST00000544327 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
SCARB1-208ENST00000544327 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
SCARB1-208ENST00000544327 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
SCARB1-208ENST00000544327 LST1O00453 97 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 DEFB130BP0DP73 79 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 DEFB130AP0DP74 79 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 UNC79Q9P2D8 2635 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 ITPR2Q14571 2701 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
SCARB1-208ENST00000544327 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
SCARB1-208ENST00000544327 H3BT86 120 aa12.37□□□□□ -0.43
SCARB1-208ENST00000544327 GYPEP15421 78 aa12.37□□□□□ -0.43
SCARB1-208ENST00000544327 MTORP42345 2549 aa12.37□□□□□ -0.43
SCARB1-208ENST00000544327 A0A087WZ39 114 aa12.37□□□□□ -0.43
SCARB1-208ENST00000544327 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
SCARB1-208ENST00000544327 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
SCARB1-208ENST00000544327 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
SCARB1-208ENST00000544327 HIVEP2P31629 2446 aa12.36□□□□□ -0.43
SCARB1-208ENST00000544327 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
SCARB1-208ENST00000544327 INAFM1C9JVW0 142 aa12.35□□□□□ -0.43
SCARB1-208ENST00000544327 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
SCARB1-208ENST00000544327 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 LINC00959A0A1B0GUT2 108 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 CLEC2BQ92478 149 aa12.34□□□□□ -0.43
SCARB1-208ENST00000544327 FAM222AQ5U5X8 452 aa12.33□□□□□ -0.44
SCARB1-208ENST00000544327 C2orf82Q6UX34 121 aa12.33□□□□□ -0.44
SCARB1-208ENST00000544327 COX7A2LO14548 114 aa12.32□□□□□ -0.44
SCARB1-208ENST00000544327 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
SCARB1-208ENST00000544327 APOC4P55056 127 aa12.32□□□□□ -0.44
SCARB1-208ENST00000544327 LINC01561Q8N1V8 128 aa12.32□□□□□ -0.44
SCARB1-208ENST00000544327 IGKV3OR2-268A0A0C4DH90 116 aa12.31□□□□□ -0.44
SCARB1-208ENST00000544327 CITED1Q99966 193 aa12.31□□□□□ -0.44
SCARB1-208ENST00000544327 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
SCARB1-208ENST00000544327 NIPBLQ6KC79 2804 aaeCLIP12.3□□□□□ -0.44
SCARB1-208ENST00000544327 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
SCARB1-208ENST00000544327 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
SCARB1-208ENST00000544327 TRAV13-2A0A0B4J235 113 aa12.29□□□□□ -0.44
SCARB1-208ENST00000544327 PAX4O43316 350 aa12.29□□□□□ -0.44
SCARB1-208ENST00000544327 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
SCARB1-208ENST00000544327 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
SCARB1-208ENST00000544327 XGP55808 180 aa12.28□□□□□ -0.44
SCARB1-208ENST00000544327 SS18Q15532 418 aa12.27□□□□□ -0.44
SCARB1-208ENST00000544327 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.44
SCARB1-208ENST00000544327 C5orf38Q86SI9 138 aa12.27□□□□□ -0.44
SCARB1-208ENST00000544327 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.44
SCARB1-208ENST00000544327 TEX49A0A1B0GTD5 131 aa12.27□□□□□ -0.45
SCARB1-208ENST00000544327 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
SCARB1-208ENST00000544327 MT-ATP8P03928 68 aa12.26□□□□□ -0.45
SCARB1-208ENST00000544327 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 WIPF1O43516 503 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 TRACP01848 142 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 SND1-IT1Q9HBX3 110 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 TRAV26-1A0A087WT03 109 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 MIFP14174 115 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
SCARB1-208ENST00000544327 LINC00158P58513 81 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 WFDC9Q8NEX5 89 aa12.25□□□□□ -0.45
SCARB1-208ENST00000544327 IGKV2-28A0A075B6P5 120 aa12.24□□□□□ -0.45
SCARB1-208ENST00000544327 IGKV2D-28P01615 120 aa12.24□□□□□ -0.45
SCARB1-208ENST00000544327 CRPP02741 224 aa12.24□□□□□ -0.45
SCARB1-208ENST00000544327 Q8IZM0 81 aa12.24□□□□□ -0.45
SCARB1-208ENST00000544327 Q8NAQ8 132 aa12.24□□□□□ -0.45
SCARB1-208ENST00000544327 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
SCARB1-208ENST00000544327 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
SCARB1-208ENST00000544327 CCL18P55774 89 aa12.23□□□□□ -0.45
SCARB1-208ENST00000544327 DAD1P61803 113 aa12.23□□□□□ -0.45
SCARB1-208ENST00000544327 XCL1P47992 114 aa12.22□□□□□ -0.45
SCARB1-208ENST00000544327 LINC00337Q8N6G1 96 aa12.22□□□□□ -0.45
SCARB1-208ENST00000544327 ATP5G1P05496 136 aa12.21□□□□□ -0.46
SCARB1-208ENST00000544327 C6orf226Q5I0X4 101 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms