RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 NTM-AS1Q6ZSK4 140 aa11.28□□□□□ -0.6
CHD4-210ENST00000544040 A0A087WYN8 130 aa11.28□□□□□ -0.6
CHD4-210ENST00000544040 LY6G6CO95867 125 aa11.28□□□□□ -0.6
CHD4-210ENST00000544040 PCOTHQ58A44 107 aa11.28□□□□□ -0.6
CHD4-210ENST00000544040 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
CHD4-210ENST00000544040 ZNF843Q8N446 348 aa11.27□□□□□ -0.6
CHD4-210ENST00000544040 COX17Q14061 63 aa11.27□□□□□ -0.6
CHD4-210ENST00000544040 BEAN1Q3B7T3 259 aa11.27□□□□□ -0.61
CHD4-210ENST00000544040 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
CHD4-210ENST00000544040 TRAV7A0A075B6U4 112 aa11.27□□□□□ -0.61
CHD4-210ENST00000544040 IGHV6-1A0A0B4J1U7 121 aa11.26□□□□□ -0.61
CHD4-210ENST00000544040 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
CHD4-210ENST00000544040 CIRBP-AS1Q8TBR5 109 aa11.26□□□□□ -0.61
CHD4-210ENST00000544040 SPINK1P00995 79 aa11.26□□□□□ -0.61
CHD4-210ENST00000544040 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
CHD4-210ENST00000544040 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
CHD4-210ENST00000544040 CDC42SE2Q9NRR3 84 aa11.26□□□□□ -0.61
CHD4-210ENST00000544040 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
CHD4-210ENST00000544040 EDN2P20800 178 aa11.25□□□□□ -0.61
CHD4-210ENST00000544040 COX6A2Q02221 97 aa11.25□□□□□ -0.61
CHD4-210ENST00000544040 PRYO14603 147 aa11.25□□□□□ -0.61
CHD4-210ENST00000544040 Q8N814 137 aa11.24□□□□□ -0.61
CHD4-210ENST00000544040 Q8IZM0 81 aa11.24□□□□□ -0.61
CHD4-210ENST00000544040 TMEM131Q92545 1883 aa11.24□□□□□ -0.61
CHD4-210ENST00000544040 KLLNB2CW77 178 aa11.24□□□□□ -0.61
CHD4-210ENST00000544040 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
CHD4-210ENST00000544040 DEFB116Q30KQ4 102 aa11.23□□□□□ -0.61
CHD4-210ENST00000544040 C1orf137Q5JT78 98 aa11.23□□□□□ -0.61
CHD4-210ENST00000544040 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
CHD4-210ENST00000544040 MED12LQ86YW9 2145 aa11.21□□□□□ -0.61
CHD4-210ENST00000544040 IGIPA6NJ69 53 aa11.21□□□□□ -0.62
CHD4-210ENST00000544040 LY6G6DO95868 133 aa11.21□□□□□ -0.62
CHD4-210ENST00000544040 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 LINC00242Q5T6M2 205 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 SHISA2Q6UWI4 295 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 PRORYQ9H606 182 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 FREM1Q5H8C1 2179 aa11.2□□□□□ -0.62
CHD4-210ENST00000544040 REG3GQ6UW15 175 aa11.19□□□□□ -0.62
CHD4-210ENST00000544040 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
CHD4-210ENST00000544040 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 LINC01006Q8NI28 216 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 C2orf16Q68DN1 1984 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 Q8N3U1 123 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 ZNF580Q9UK33 172 aa11.18□□□□□ -0.62
CHD4-210ENST00000544040 CRYGAP11844 174 aa11.17□□□□□ -0.62
CHD4-210ENST00000544040 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
CHD4-210ENST00000544040 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
CHD4-210ENST00000544040 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
CHD4-210ENST00000544040 LINC00575Q6W349 94 aa11.16□□□□□ -0.62
CHD4-210ENST00000544040 LINC00310P59036 64 aa11.16□□□□□ -0.62
CHD4-210ENST00000544040 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
CHD4-210ENST00000544040 Q8N6K4 173 aa11.16□□□□□ -0.62
CHD4-210ENST00000544040 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
CHD4-210ENST00000544040 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
CHD4-210ENST00000544040 NUP210LQ5VU65 1888 aa11.15□□□□□ -0.63
CHD4-210ENST00000544040 H0Y9P7 68 aa11.14□□□□□ -0.63
CHD4-210ENST00000544040 OXLD1Q5BKU9 147 aa11.14□□□□□ -0.63
CHD4-210ENST00000544040 CHCHD7Q9BUK0 85 aa11.14□□□□□ -0.63
CHD4-210ENST00000544040 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
CHD4-210ENST00000544040 ALPK3Q96L96 1907 aa11.13□□□□□ -0.63
CHD4-210ENST00000544040 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
CHD4-210ENST00000544040 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
CHD4-210ENST00000544040 Q9UF83 564 aa11.13□□□□□ -0.63
CHD4-210ENST00000544040 Q9BRP9 147 aa11.12□□□□□ -0.63
CHD4-210ENST00000544040 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
CHD4-210ENST00000544040 A8MTW9 85 aa11.12□□□□□ -0.63
CHD4-210ENST00000544040 FSTL3O95633 263 aa11.11□□□□□ -0.63
CHD4-210ENST00000544040 A0A087WSZ3 146 aa11.1□□□□□ -0.63
CHD4-210ENST00000544040 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
CHD4-210ENST00000544040 EGFEM1PQ0D2K5 195 aa11.1□□□□□ -0.63
CHD4-210ENST00000544040 BRI3O95415 125 aa11.09□□□□□ -0.63
CHD4-210ENST00000544040 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
CHD4-210ENST00000544040 CNFNQ9BYD5 112 aa11.09□□□□□ -0.63
CHD4-210ENST00000544040 PCDH15Q96QU1 1955 aa11.08□□□□□ -0.64
CHD4-210ENST00000544040 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
CHD4-210ENST00000544040 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
CHD4-210ENST00000544040 CSDC2Q9Y534 153 aaKnown RBP11.06□□□□□ -0.64
CHD4-210ENST00000544040 HCG22E2RYF7 251 aa11.06□□□□□ -0.64
CHD4-210ENST00000544040 MUC7Q8TAX7 377 aa11.06□□□□□ -0.64
CHD4-210ENST00000544040 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
CHD4-210ENST00000544040 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
CHD4-210ENST00000544040 TMEM254Q8TBM7 123 aa11.05□□□□□ -0.64
CHD4-210ENST00000544040 NUPR2A6NF83 97 aa11.05□□□□□ -0.64
CHD4-210ENST00000544040 SMR3AQ99954 134 aa11.05□□□□□ -0.64
CHD4-210ENST00000544040 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
CHD4-210ENST00000544040 Q6ZSN1 163 aa11.04□□□□□ -0.64
CHD4-210ENST00000544040 FAM208BQ5VWN6 2430 aa11.04□□□□□ -0.64
CHD4-210ENST00000544040 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
CHD4-210ENST00000544040 FHL2Q14192 279 aa11.03□□□□□ -0.64
CHD4-210ENST00000544040 SORL1Q92673 2214 aa11.03□□□□□ -0.64
CHD4-210ENST00000544040 HIVEP2P31629 2446 aa11.03□□□□□ -0.64
CHD4-210ENST00000544040 AVPP01185 164 aa11.03□□□□□ -0.64
CHD4-210ENST00000544040 Q6ZTC4 211 aa11.02□□□□□ -0.65
CHD4-210ENST00000544040 HCFC1P51610 2035 aa11.01□□□□□ -0.65
CHD4-210ENST00000544040 PCNX3Q9H6A9 2034 aa11.01□□□□□ -0.65
CHD4-210ENST00000544040 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
CHD4-210ENST00000544040 PRLHP81277 87 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms