RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 LINC00474Q9P2X8 69 aa8.19□□□□□ -1.1
TNFRSF1A-215ENST00000543359 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
TNFRSF1A-215ENST00000543359 PTTG1IPP53801 180 aa8.18□□□□□ -1.1
TNFRSF1A-215ENST00000543359 IFITM2Q01629 132 aa8.18□□□□□ -1.1
TNFRSF1A-215ENST00000543359 C7orf33Q8WU49 177 aa8.18□□□□□ -1.1
TNFRSF1A-215ENST00000543359 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
TNFRSF1A-215ENST00000543359 ADCYAP1P18509 176 aa8.17□□□□□ -1.1
TNFRSF1A-215ENST00000543359 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
TNFRSF1A-215ENST00000543359 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
TNFRSF1A-215ENST00000543359 LAMTOR2Q9Y2Q5 125 aa8.17□□□□□ -1.1
TNFRSF1A-215ENST00000543359 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
TNFRSF1A-215ENST00000543359 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
TNFRSF1A-215ENST00000543359 A0A1W2PNN7 141 aa8.16□□□□□ -1.1
TNFRSF1A-215ENST00000543359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-215ENST00000543359 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
TNFRSF1A-215ENST00000543359 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 APOMO95445 188 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 RAB5AP20339 215 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 RNF151Q2KHN1 245 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 SERTAD4-AS1Q5TG53 156 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 Q8N8P6 123 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
TNFRSF1A-215ENST00000543359 A0A0J9YXV3 536 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 IMMP2LQ96T52 175 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 MAP1LC3AQ9H492 121 aa8.14□□□□□ -1.11
TNFRSF1A-215ENST00000543359 A0A087WZ39 114 aa8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 TMEM218A2RU14 115 aa8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 IFI27P40305 119 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 MRPL35Q9NZE8 188 aaKnown RBP8.13□□□□□ -1.11
TNFRSF1A-215ENST00000543359 F8WDY8 70 aa8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 AMELXQ99217 191 aa8.12□□□□□ -1.11
TNFRSF1A-215ENST00000543359 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
TNFRSF1A-215ENST00000543359 UBE2D1P51668 147 aa8.11□□□□□ -1.11
TNFRSF1A-215ENST00000543359 C2orf66Q6UXQ4 117 aa8.11□□□□□ -1.11
TNFRSF1A-215ENST00000543359 LRP2P98164 4655 aa8.11□□□□□ -1.11
TNFRSF1A-215ENST00000543359 K7EMI3 77 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 ORMDL2Q53FV1 153 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 C9orf116Q5BN46 136 aaPredicted RBP8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 CTDSP1Q9GZU7 261 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
TNFRSF1A-215ENST00000543359 TGIF2-C20orf24A0A0A6YYL0 155 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 Q6ZRP5 223 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 CYSLTR1Q9Y271 337 aa8.09□□□□□ -1.11
TNFRSF1A-215ENST00000543359 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 NDUFA1O15239 70 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 NPSP0C0P6 89 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
TNFRSF1A-215ENST00000543359 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
TNFRSF1A-215ENST00000543359 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
TNFRSF1A-215ENST00000543359 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
TNFRSF1A-215ENST00000543359 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
TNFRSF1A-215ENST00000543359 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
TNFRSF1A-215ENST00000543359 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
TNFRSF1A-215ENST00000543359 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
TNFRSF1A-215ENST00000543359 VCX2Q9H322 139 aa8.06□□□□□ -1.12
TNFRSF1A-215ENST00000543359 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
TNFRSF1A-215ENST00000543359 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
TNFRSF1A-215ENST00000543359 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
TNFRSF1A-215ENST00000543359 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
TNFRSF1A-215ENST00000543359 C2orf88Q9BSF0 95 aa8.05□□□□□ -1.12
TNFRSF1A-215ENST00000543359 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
TNFRSF1A-215ENST00000543359 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
TNFRSF1A-215ENST00000543359 Q6ZN92 141 aa8.04□□□□□ -1.12
TNFRSF1A-215ENST00000543359 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
TNFRSF1A-215ENST00000543359 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-215ENST00000543359 ODF1Q14990 250 aa8.03□□□□□ -1.12
TNFRSF1A-215ENST00000543359 COMMD7Q86VX2 200 aa8.03□□□□□ -1.12
TNFRSF1A-215ENST00000543359 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
TNFRSF1A-215ENST00000543359 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-215ENST00000543359 GAGE2DQ9UEU5 116 aa8.02□□□□□ -1.13
TNFRSF1A-215ENST00000543359 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
TNFRSF1A-215ENST00000543359 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 MT-ND6P03923 174 aa8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 G0S2P27469 103 aa8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 ERASQ7Z444 233 aa8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
TNFRSF1A-215ENST00000543359 S100PP25815 95 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms