RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 TPPP3Q9BW30 176 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 TRBV20-1A0A075B6N2 111 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 FAM236DA0A1B0GTK5 79 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 GAGE10A6NGK3 116 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 F8WDY8 70 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 IGLC6P0CF74 106 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 FAM236CP0DP71 79 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 RPS29P62273 56 aaKnown RBP1.65□□□□□ -2.15
CHD4-209ENST00000542717 C10orf25Q5T742 122 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 LCE3BQ5TA77 95 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 CST9LP1Q5W188 147 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 MZT2BQ6NZ67 158 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 UNQ6190/PRO20217Q6UXQ8 127 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 FAM19A1Q7Z5A9 133 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 MRPL52Q86TS9 123 aaKnown RBP1.65□□□□□ -2.15
CHD4-209ENST00000542717 BAGE2Q86Y30 109 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 CBLN2Q8IUK8 224 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 GATD1Q8NB37 220 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 ORAOV1Q8WV07 137 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 C6orf48Q9UBA6 75 aa1.65□□□□□ -2.15
CHD4-209ENST00000542717 SCO2A0A1W2PP80 73 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 XKRY2A2RUG3 117 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 MAP1LC3B2A6NCE7 125 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 SDHAF1A6NFY7 115 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 C1orf196B1AJZ1 125 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 NDUFC2-KCTD14E9PQ53 114 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 F2Z2F3 143 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 INMT-MINDY4F8WBC2 141 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 I3L3M4 83 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 PMCHP20382 165 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 LINC00469Q8N7U9 141 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 Q8N9P0 234 aaPredicted RBP1.64□□□□□ -2.15
CHD4-209ENST00000542717 OR10D4PQ8NGN7 298 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 PLEKHB2Q96CS7 222 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 MRAP2Q96G30 205 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 LINC00167Q96N53 147 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 FAM210AQ96ND0 272 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 HIGD2AQ9BW72 106 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 MAP1LC3BQ9GZQ8 125 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 XAGE1AQ9HD64 81 aa1.64□□□□□ -2.15
CHD4-209ENST00000542717 FXYD6-FXYD2A0A087WZ82 144 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 IGLV9-49A0A0B4J1Y8 123 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 TRAV13-1A0A0B4J241 112 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 TRBV6-5A0A0K0K1A5 114 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 C7orf77A4D0Y5 90 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 SSNA1O43805 119 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 PAGE4O60829 102 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 PFDN1O60925 122 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 TAGLN2P37802 199 aaKnown RBP1.63□□□□□ -2.15
CHD4-209ENST00000542717 RPL35P42766 123 aaKnown RBP1.63□□□□□ -2.15
CHD4-209ENST00000542717 DEFA1P59665 94 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 SMAGPQ0VAQ4 97 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 PNRC1Q12796 327 aaPredicted RBP1.63□□□□□ -2.15
CHD4-209ENST00000542717 TWIST1Q15672 202 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 AKR1C8PQ5T2L2 129 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 TEX261Q6UWH6 196 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 Q6ZVH6 145 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 TMUB2Q71RG4 321 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 C9orf62Q8N4C0 152 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 ENKURQ8TC29 256 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 RPL39LQ96EH5 51 aaKnown RBP1.63□□□□□ -2.15
CHD4-209ENST00000542717 CNFNQ9BYD5 112 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 CYTL1Q9NRR1 136 aa1.63□□□□□ -2.15
CHD4-209ENST00000542717 CSDC2Q9Y534 153 aaKnown RBP1.63□□□□□ -2.15
CHD4-209ENST00000542717 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 BORCS7-ASMTA0A0B4J1R7 106 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 ZNF727A8MUV8 499 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 IFNA1P01562 189 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 NPSP0C0P6 89 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 RPL32P62910 135 aaKnown RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 MOBPQ13875 183 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 C6orf99Q4VX62 202 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 CENPWQ5EE01 88 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 RNASE13Q5GAN3 156 aaKnown RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 RPL7L1Q6DKI1 246 aaKnown RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 SMIM15Q7Z3B0 74 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 LINC01551Q86U37 167 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 SPRR4Q96PI1 79 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 TIMM17AQ99595 171 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 GNB1LQ9BYB4 327 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 RNASE7Q9H1E1 156 aaKnown RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 TMEM242Q9NWH2 141 aa1.62□□□□□ -2.15
CHD4-209ENST00000542717 ZNF706Q9Y5V0 76 aaPredicted RBP1.62□□□□□ -2.15
CHD4-209ENST00000542717 IGKV2-28A0A075B6P5 120 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 TRBV30A0A0K0K1B3 111 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 RAB19A4D1S5 217 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 IGKV2D-28P01615 120 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 POLR2KP53803 58 aaKnown RBP1.61□□□□□ -2.15
CHD4-209ENST00000542717 FOXA3P55318 350 aaPredicted RBP1.61□□□□□ -2.15
CHD4-209ENST00000542717 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 LCE1AQ5T7P2 110 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 ATP11AUNQ6ZP68 121 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 Q6ZUT4 128 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 FAM231DQ6ZW35 169 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 NKAPP1Q8N9T2 125 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms