RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 SPAG11BQ08648 103 aa12.67□□□□□ -0.38
DDB1-220ENST00000542337 OR10D4PQ8NGN7 298 aa12.67□□□□□ -0.38
DDB1-220ENST00000542337 IFITM10A6NMD0 228 aa12.66□□□□□ -0.38
DDB1-220ENST00000542337 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
DDB1-220ENST00000542337 ANAPC16Q96DE5 110 aa12.66□□□□□ -0.38
DDB1-220ENST00000542337 F8WDY8 70 aa12.65□□□□□ -0.38
DDB1-220ENST00000542337 OPRPNQ99935 248 aaPredicted RBP12.65□□□□□ -0.38
DDB1-220ENST00000542337 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
DDB1-220ENST00000542337 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
DDB1-220ENST00000542337 RNF151Q2KHN1 245 aa12.64□□□□□ -0.39
DDB1-220ENST00000542337 Q6ZRP5 223 aa12.64□□□□□ -0.39
DDB1-220ENST00000542337 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
DDB1-220ENST00000542337 TGIF2-C20orf24A0A0A6YYL0 155 aa12.63□□□□□ -0.39
DDB1-220ENST00000542337 MT1HL1P0DM35 61 aa12.63□□□□□ -0.39
DDB1-220ENST00000542337 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
DDB1-220ENST00000542337 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
DDB1-220ENST00000542337 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
DDB1-220ENST00000542337 PYGO1Q9Y3Y4 419 aa12.62□□□□□ -0.39
DDB1-220ENST00000542337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
DDB1-220ENST00000542337 NDUFA1O15239 70 aa12.61□□□□□ -0.39
DDB1-220ENST00000542337 SPINK6Q6UWN8 80 aa12.61□□□□□ -0.39
DDB1-220ENST00000542337 FAM104AQ969W3 186 aa12.61□□□□□ -0.39
DDB1-220ENST00000542337 IMMP2LQ96T52 175 aa12.61□□□□□ -0.39
DDB1-220ENST00000542337 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
DDB1-220ENST00000542337 REG3GQ6UW15 175 aa12.6□□□□□ -0.39
DDB1-220ENST00000542337 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
DDB1-220ENST00000542337 TMEM141Q96I45 108 aa12.59□□□□□ -0.39
DDB1-220ENST00000542337 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 C9orf116Q5BN46 136 aaPredicted RBP12.58□□□□□ -0.4
DDB1-220ENST00000542337 Q6ZN92 141 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 Q8N8P6 123 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 HMCN2Q8NDA2 5059 aa12.58□□□□□ -0.4
DDB1-220ENST00000542337 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
DDB1-220ENST00000542337 TEX43Q6ZNM6 134 aa12.57□□□□□ -0.4
DDB1-220ENST00000542337 CYSLTR1Q9Y271 337 aa12.57□□□□□ -0.4
DDB1-220ENST00000542337 ORMDL2Q53FV1 153 aa12.56□□□□□ -0.4
DDB1-220ENST00000542337 CTDSP1Q9GZU7 261 aa12.56□□□□□ -0.4
DDB1-220ENST00000542337 A0A087WZ39 114 aa12.55□□□□□ -0.4
DDB1-220ENST00000542337 MT-ND6P03923 174 aa12.55□□□□□ -0.4
DDB1-220ENST00000542337 K7EMI3 77 aa12.54□□□□□ -0.4
DDB1-220ENST00000542337 G0S2P27469 103 aa12.54□□□□□ -0.4
DDB1-220ENST00000542337 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
DDB1-220ENST00000542337 C2orf66Q6UXQ4 117 aa12.54□□□□□ -0.4
DDB1-220ENST00000542337 VCX2Q9H322 139 aa12.54□□□□□ -0.4
DDB1-220ENST00000542337 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDB1-220ENST00000542337 CLLU1Q5K131 121 aa12.53□□□□□ -0.4
DDB1-220ENST00000542337 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
DDB1-220ENST00000542337 NXT2Q9NPJ8 142 aaKnown RBP12.52□□□□□ -0.41
DDB1-220ENST00000542337 NPSP0C0P6 89 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 TLX1NBP0CAT3 122 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 UBE2D1P51668 147 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 C10orf25Q5T742 122 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 LINC01561Q8N1V8 128 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
DDB1-220ENST00000542337 PAPPA-AS1Q5QFB9 102 aa12.5□□□□□ -0.41
DDB1-220ENST00000542337 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
DDB1-220ENST00000542337 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
DDB1-220ENST00000542337 PSORS1C2Q9UIG4 136 aa12.5□□□□□ -0.41
DDB1-220ENST00000542337 PRSS2P07478 247 aa12.49□□□□□ -0.41
DDB1-220ENST00000542337 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
DDB1-220ENST00000542337 UQCC3Q6UW78 93 aa12.49□□□□□ -0.41
DDB1-220ENST00000542337 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
DDB1-220ENST00000542337 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
DDB1-220ENST00000542337 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
DDB1-220ENST00000542337 C1orf137Q5JT78 98 aa12.48□□□□□ -0.41
DDB1-220ENST00000542337 AMELXQ99217 191 aa12.48□□□□□ -0.41
DDB1-220ENST00000542337 SEC11AP67812 179 aa12.47□□□□□ -0.41
DDB1-220ENST00000542337 IGIPA6NJ69 53 aa12.46□□□□□ -0.41
DDB1-220ENST00000542337 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
DDB1-220ENST00000542337 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
DDB1-220ENST00000542337 CKS1BP61024 79 aa12.45□□□□□ -0.42
DDB1-220ENST00000542337 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
DDB1-220ENST00000542337 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
DDB1-220ENST00000542337 S100PP25815 95 aa12.44□□□□□ -0.42
DDB1-220ENST00000542337 KRTAP10-8P60410 259 aa12.44□□□□□ -0.42
DDB1-220ENST00000542337 C6orf226Q5I0X4 101 aa12.44□□□□□ -0.42
DDB1-220ENST00000542337 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
DDB1-220ENST00000542337 TOMM7Q9P0U1 55 aa12.44□□□□□ -0.42
DDB1-220ENST00000542337 TNXBP22105 4242 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 NDUFC2-KCTD14E9PQ53 114 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 HERVK_113P63121 156 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 KIAA1644Q3SXP7 199 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 LINC00173Q6ZV60 143 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 TIMM17AQ99595 171 aa12.43□□□□□ -0.42
DDB1-220ENST00000542337 GEMIN7Q9H840 131 aaKnown RBP12.43□□□□□ -0.42
DDB1-220ENST00000542337 FAM19A3Q7Z5A8 133 aa12.42□□□□□ -0.42
DDB1-220ENST00000542337 DIRC1Q969H9 104 aa12.41□□□□□ -0.42
DDB1-220ENST00000542337 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
DDB1-220ENST00000542337 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
DDB1-220ENST00000542337 IGLV7-43P04211 117 aa12.4□□□□□ -0.42
DDB1-220ENST00000542337 ADCYAP1P18509 176 aa12.4□□□□□ -0.42
DDB1-220ENST00000542337 UBE2BP63146 152 aa12.4□□□□□ -0.42
DDB1-220ENST00000542337 SCGB3A1Q96QR1 104 aa12.4□□□□□ -0.42
DDB1-220ENST00000542337 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
DDB1-220ENST00000542337 M0QXV9 152 aa12.39□□□□□ -0.43
DDB1-220ENST00000542337 ERASQ7Z444 233 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms