RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
LDHA-220ENST00000542179 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
LDHA-220ENST00000542179 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
LDHA-220ENST00000542179 TMEM223A0PJW6 202 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 E9PLD3 99 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
LDHA-220ENST00000542179 CCL18P55774 89 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 HERVK_113P63121 156 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
LDHA-220ENST00000542179 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
LDHA-220ENST00000542179 MRPS16Q9Y3D3 137 aaKnown RBP6.29□□□□□ -1.4
LDHA-220ENST00000542179 PRKDCP78527 4128 aaKnown RBP6.28□□□□□ -1.4
LDHA-220ENST00000542179 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 LINC00959A0A1B0GUT2 108 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 HERVK_113P61574 105 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 WFDC10BQ8IUB3 73 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 PRO1933Q9H354 126 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 PRR34Q9NV39 138 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 KLK5Q9Y337 293 aaPredicted RBP6.28□□□□□ -1.4
LDHA-220ENST00000542179 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
LDHA-220ENST00000542179 IGKV2D-26A0A0A0MRZ7 120 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 H3BRM9 83 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 DLEU1O43261 78 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 ANGP03950 147 aaKnown RBP6.27□□□□□ -1.41
LDHA-220ENST00000542179 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 COX8AP10176 69 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 COX6A2Q02221 97 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 REG3AQ06141 175 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 SS18Q15532 418 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 LINC00269Q8N2A0 174 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 UQCR10Q9UDW1 63 aa6.27□□□□□ -1.41
LDHA-220ENST00000542179 BOD1L2Q8IYS8 172 aa6.26□□□□□ -1.41
LDHA-220ENST00000542179 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
LDHA-220ENST00000542179 C14orf144Q96I85 54 aa6.26□□□□□ -1.41
LDHA-220ENST00000542179 CDKN2A-AS1Q9UH64 79 aa6.26□□□□□ -1.41
LDHA-220ENST00000542179 HYDINQ4G0P3 5121 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV3OR16-9A0A0B4J2B5 98 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV1-58A0A0C4DH39 117 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 LEPROTO15243 131 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV3-30P01768 117 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV3-33P01772 117 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV3-30-3P0DP02 117 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 IGHV3-30-5P0DP03 117 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 DDTP30046 118 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 NMUP48645 174 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 SLC25A34Q6PIV7 304 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 LINC01561Q8N1V8 128 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
LDHA-220ENST00000542179 STAB2Q8WWQ8 2551 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 A0A087WZ39 114 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 K7EP13 123 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 SIVA1O15304 175 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 MIAQ16674 131 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
LDHA-220ENST00000542179 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
LDHA-220ENST00000542179 PCP4L1A6NKN8 68 aa6.23□□□□□ -1.41
LDHA-220ENST00000542179 J3QQQ9 107 aa6.23□□□□□ -1.41
LDHA-220ENST00000542179 CRPP02741 224 aa6.23□□□□□ -1.41
LDHA-220ENST00000542179 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
LDHA-220ENST00000542179 TRAV8-3A0A0A6YYJ7 113 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
LDHA-220ENST00000542179 SPINK8P0C7L1 97 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 MAPKAPK5-AS1Q8N8E1 139 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 UBE2WQ96B02 151 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 Q9H8V8 135 aa6.22□□□□□ -1.41
LDHA-220ENST00000542179 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 LGALS3P17931 250 aaKnown RBP6.21□□□□□ -1.42
LDHA-220ENST00000542179 XCL1P47992 114 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
LDHA-220ENST00000542179 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 FOXI1Q12951 378 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 ZFAND6Q6FIF0 208 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 MUC7Q8TAX7 377 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 WWC2-AS2Q96NR7 200 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
LDHA-220ENST00000542179 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
LDHA-220ENST00000542179 COX7A2LO14548 114 aa6.2□□□□□ -1.42
LDHA-220ENST00000542179 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
LDHA-220ENST00000542179 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
LDHA-220ENST00000542179 C5orf38Q86SI9 138 aa6.2□□□□□ -1.42
LDHA-220ENST00000542179 IGLV10-54A0A075B6I4 117 aa6.19□□□□□ -1.42
LDHA-220ENST00000542179 GAGE12HA6NDE8 117 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms