RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 MRPL35Q9NZE8 188 aaKnown RBP5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 CSMD3Q7Z407 3707 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 TRGV4A0A0C4DH28 118 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 GAGE12JA6NER3 117 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 GAGE4Q13068 117 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 FHL2Q14192 279 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 LAGE3Q14657 143 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 ZNRF2Q8NHG8 242 aa5.44□□□□□ -1.54
AC005840.3-201ENST00000541888 TGP01266 2768 aa5.43□□□□□ -1.54
AC005840.3-201ENST00000541888 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
AC005840.3-201ENST00000541888 TRAV4A0A0B4J268 109 aa5.43□□□□□ -1.54
AC005840.3-201ENST00000541888 SS18L2Q9UHA2 77 aa5.43□□□□□ -1.54
AC005840.3-201ENST00000541888 RHODO00212 210 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 MIFP14174 115 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 DAD1P61803 113 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 ORMDL2Q53FV1 153 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 KPRPQ5T749 579 aaPredicted RBP5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 CEMP1Q6PRD7 247 aaPredicted RBP5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 NFE4Q86UQ8 179 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 LINC01600Q96MT4 127 aa5.42□□□□□ -1.54
AC005840.3-201ENST00000541888 SMIM9A6NGZ8 99 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 LINC01549A6NIU2 74 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 A8MZ25 164 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 K7EQD1 137 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 POLR2KP53803 58 aaKnown RBP5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 NANOS2P60321 138 aaKnown RBP5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 MRPL23Q16540 153 aaKnown RBP5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 Q6ZTC4 211 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 CARD19Q96LW7 228 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 TENM2Q9NT68 2774 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 PRSS29PA6NIE9 313 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 F5H768 121 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 TSHBP01222 138 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 PSMB2P49721 201 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 PAPPA-AS1Q5QFB9 102 aa5.41□□□□□ -1.54
AC005840.3-201ENST00000541888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
AC005840.3-201ENST00000541888 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
AC005840.3-201ENST00000541888 HERVK_113P61574 105 aa5.4□□□□□ -1.54
AC005840.3-201ENST00000541888 ZFP2Q6ZN57 461 aa5.4□□□□□ -1.54
AC005840.3-201ENST00000541888 PTH2Q96A98 100 aa5.4□□□□□ -1.54
AC005840.3-201ENST00000541888 TRBV27A0A0K0K1C4 114 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 SNCGO76070 127 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 GYPEP15421 78 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 NDUFV3P56181 108 aaKnown RBP5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 NTM-AS1Q6ZSK4 140 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 ANKRD29Q8N6D5 301 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 TP53TG1Q9Y2A0 90 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 FBN3Q75N90 2809 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 DNAH7Q8WXX0 4024 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 ZNF815PA8K554 130 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 LYRM9A8MSI8 78 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 SCGB1C2P0DMR2 95 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 PIK3CD-AS1Q5SR53 167 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 C2orf66Q6UXQ4 117 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 VSIG2Q96IQ7 327 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 KIR2DL4Q99706 377 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 TM2D3Q9BRN9 247 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 PRADC1Q9BSG0 188 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
AC005840.3-201ENST00000541888 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 B5MCH6 92 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 I3L3M4 83 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 VCYO14598 125 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 TCL1BO95988 128 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 NHLRC4P0CG21 123 aaPredicted RBP5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 LINC00694P0DN24 101 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 IFITM1P13164 125 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 SCGB1D4Q6XE38 83 aa5.38□□□□□ -1.55
AC005840.3-201ENST00000541888 PPP1R17O96001 155 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 ATP5G1P05496 136 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 RPL13AP40429 203 aaKnown RBP5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 RPL36AP83881 106 aaKnown RBP5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 SRSF9Q13242 221 aaKnown RBP eCLIP5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 TTC32Q5I0X7 151 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 SLC25A20O43772 301 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 RPL32P62910 135 aaKnown RBP5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 RHOHQ15669 191 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 CHCHD7Q9BUK0 85 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
AC005840.3-201ENST00000541888 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
AC005840.3-201ENST00000541888 TRBV6-4A0A1B0GX49 114 aa5.36□□□□□ -1.55
AC005840.3-201ENST00000541888 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
AC005840.3-201ENST00000541888 BAALCQ8WXS3 180 aa5.36□□□□□ -1.55
AC005840.3-201ENST00000541888 PRO0255Q9UI72 69 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms