RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 WFDC10BQ8IUB3 73 aa18.89■□□□□ 0.61
CCM2-218ENST00000541586 LINC00476Q8WZB0 136 aa18.89■□□□□ 0.61
CCM2-218ENST00000541586 CDKN2A-AS1Q9UH64 79 aa18.89■□□□□ 0.61
CCM2-218ENST00000541586 ANGP03950 147 aaKnown RBP18.88■□□□□ 0.61
CCM2-218ENST00000541586 LINC00269Q8N2A0 174 aa18.88■□□□□ 0.61
CCM2-218ENST00000541586 LINC00959A0A1B0GUT2 108 aa18.87■□□□□ 0.61
CCM2-218ENST00000541586 CLPSL2Q6UWE3 100 aa18.87■□□□□ 0.61
CCM2-218ENST00000541586 DLEU1O43261 78 aa18.86■□□□□ 0.61
CCM2-218ENST00000541586 HNRNPA3P51991 378 aaKnown RBP18.86■□□□□ 0.61
CCM2-218ENST00000541586 IGHV3-64A0A075B6Q5 118 aa18.85■□□□□ 0.61
CCM2-218ENST00000541586 MAPKAPK5-AS1Q8N8E1 139 aa18.84■□□□□ 0.61
CCM2-218ENST00000541586 VPS13DQ5THJ4 4388 aa18.84■□□□□ 0.61
CCM2-218ENST00000541586 H3BRM9 83 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 IGHV3-30P01768 117 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 IGHV3-33P01772 117 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 SPINK8P0C7L1 97 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 IGHV3-30-3P0DP02 117 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 IGHV3-30-5P0DP03 117 aa18.83■□□□□ 0.61
CCM2-218ENST00000541586 MRPS16Q9Y3D3 137 aaKnown RBP18.83■□□□□ 0.61
CCM2-218ENST00000541586 REG3AQ06141 175 aa18.83■□□□□ 0.6
CCM2-218ENST00000541586 TRAV8-3A0A0A6YYJ7 113 aa18.82■□□□□ 0.6
CCM2-218ENST00000541586 LEPROTO15243 131 aa18.82■□□□□ 0.6
CCM2-218ENST00000541586 TSPEAR-AS2P59090 65 aa18.82■□□□□ 0.6
CCM2-218ENST00000541586 ALMS1Q8TCU4 4167 aa18.81■□□□□ 0.6
CCM2-218ENST00000541586 SS18Q15532 418 aa18.81■□□□□ 0.6
CCM2-218ENST00000541586 Q9H8V8 135 aa18.8■□□□□ 0.6
CCM2-218ENST00000541586 KLK12Q9UKR0 248 aa18.8■□□□□ 0.6
CCM2-218ENST00000541586 IGHV1-58A0A0C4DH39 117 aa18.8■□□□□ 0.6
CCM2-218ENST00000541586 J3QQQ9 107 aa18.8■□□□□ 0.6
CCM2-218ENST00000541586 C2orf91Q6ZV80 131 aa18.8■□□□□ 0.6
CCM2-218ENST00000541586 KMT2AQ03164 3969 aa18.79■□□□□ 0.6
CCM2-218ENST00000541586 DNAH1Q9P2D7 4330 aa18.79■□□□□ 0.6
CCM2-218ENST00000541586 CTAG1AP78358 180 aa18.79■□□□□ 0.6
CCM2-218ENST00000541586 SACSQ9NZJ4 4579 aa18.78■□□□□ 0.6
CCM2-218ENST00000541586 IGHV3OR16-9A0A0B4J2B5 98 aa18.78■□□□□ 0.6
CCM2-218ENST00000541586 LCE6AA0A183 80 aa18.78■□□□□ 0.6
CCM2-218ENST00000541586 CCL25O15444 150 aa18.78■□□□□ 0.6
CCM2-218ENST00000541586 PRR34Q9NV39 138 aa18.78■□□□□ 0.6
CCM2-218ENST00000541586 MYMXA0A1B0GTQ4 84 aa18.77■□□□□ 0.6
CCM2-218ENST00000541586 PLEKHB2Q96CS7 222 aa18.77■□□□□ 0.6
CCM2-218ENST00000541586 UPK3BQ9BT76 320 aa18.77■□□□□ 0.6
CCM2-218ENST00000541586 KMT2CQ8NEZ4 4911 aaKnown RBP18.77■□□□□ 0.6
CCM2-218ENST00000541586 XCL1P47992 114 aa18.77■□□□□ 0.59
CCM2-218ENST00000541586 ZNF815PA8K554 130 aa18.76■□□□□ 0.59
CCM2-218ENST00000541586 SMIM1B2RUZ4 78 aa18.76■□□□□ 0.59
CCM2-218ENST00000541586 SIVA1O15304 175 aa18.76■□□□□ 0.59
CCM2-218ENST00000541586 LGALS3P17931 250 aaKnown RBP18.76■□□□□ 0.59
CCM2-218ENST00000541586 LINC01556Q5JQF7 62 aa18.75■□□□□ 0.59
CCM2-218ENST00000541586 ENHOQ6UWT2 76 aa18.74■□□□□ 0.59
CCM2-218ENST00000541586 IGLV10-54A0A075B6I4 117 aa18.74■□□□□ 0.59
CCM2-218ENST00000541586 IGLV5-39A0A0G2JS06 123 aa18.74■□□□□ 0.59
CCM2-218ENST00000541586 CHCHD10Q8WYQ3 142 aaPredicted RBP18.73■□□□□ 0.59
CCM2-218ENST00000541586 HYDINQ4G0P3 5121 aa18.72■□□□□ 0.59
CCM2-218ENST00000541586 A0A087WZ39 114 aa18.71■□□□□ 0.59
CCM2-218ENST00000541586 M0R2N4 97 aa18.71■□□□□ 0.59
CCM2-218ENST00000541586 DNAH10OSP0CZ25 163 aa18.71■□□□□ 0.59
CCM2-218ENST00000541586 C5orf38Q86SI9 138 aa18.71■□□□□ 0.59
CCM2-218ENST00000541586 UBE2WQ96B02 151 aa18.71■□□□□ 0.59
CCM2-218ENST00000541586 CRPP02741 224 aa18.7■□□□□ 0.58
CCM2-218ENST00000541586 CD164L2Q6UWJ8 174 aa18.7■□□□□ 0.58
CCM2-218ENST00000541586 HIGD1BQ9P298 99 aa18.69■□□□□ 0.58
CCM2-218ENST00000541586 SCGB1D4Q6XE38 83 aa18.66■□□□□ 0.58
CCM2-218ENST00000541586 NDUFA12Q9UI09 145 aa18.66■□□□□ 0.58
CCM2-218ENST00000541586 TRAV8-4A0A0B4J246 113 aa18.64■□□□□ 0.57
CCM2-218ENST00000541586 FOXI1Q12951 378 aa18.64■□□□□ 0.57
CCM2-218ENST00000541586 MIAQ16674 131 aa18.64■□□□□ 0.57
CCM2-218ENST00000541586 SNHG12Q9BXW3 62 aa18.64■□□□□ 0.57
CCM2-218ENST00000541586 NBDYA0A0U1RRE5 68 aa18.63■□□□□ 0.57
CCM2-218ENST00000541586 GAGE12HA6NDE8 117 aa18.63■□□□□ 0.57
CCM2-218ENST00000541586 COX7A2LO14548 114 aa18.63■□□□□ 0.57
CCM2-218ENST00000541586 C10orf126Q8N4M7 172 aa18.63■□□□□ 0.57
CCM2-218ENST00000541586 M0R143 59 aa18.62■□□□□ 0.57
CCM2-218ENST00000541586 HINT1P49773 126 aaPredicted RBP18.62■□□□□ 0.57
CCM2-218ENST00000541586 LINC01561Q8N1V8 128 aa18.62■□□□□ 0.57
CCM2-218ENST00000541586 EREGO14944 169 aa18.61■□□□□ 0.57
CCM2-218ENST00000541586 COX7B2Q8TF08 81 aa18.6■□□□□ 0.57
CCM2-218ENST00000541586 NDUFA1O15239 70 aa18.59■□□□□ 0.57
CCM2-218ENST00000541586 HSD52Q0P140 79 aa18.59■□□□□ 0.57
CCM2-218ENST00000541586 KRTAP1-5Q9BYS1 174 aa18.59■□□□□ 0.57
CCM2-218ENST00000541586 TOMM7Q9P0U1 55 aa18.59■□□□□ 0.57
CCM2-218ENST00000541586 BATFQ16520 125 aa18.58■□□□□ 0.57
CCM2-218ENST00000541586 A0A0J9YXY3 114 aa18.57■□□□□ 0.56
CCM2-218ENST00000541586 TTC32Q5I0X7 151 aa18.57■□□□□ 0.56
CCM2-218ENST00000541586 DNAH6Q9C0G6 4158 aa18.57■□□□□ 0.56
CCM2-218ENST00000541586 MALP21145 153 aa18.57■□□□□ 0.56
CCM2-218ENST00000541586 BVES-AS1Q5T3Y7 98 aa18.55■□□□□ 0.56
CCM2-218ENST00000541586 KRTAP26-1Q6PEX3 210 aa18.55■□□□□ 0.56
CCM2-218ENST00000541586 ZNF625Q96I27 306 aaPredicted RBP18.55■□□□□ 0.56
CCM2-218ENST00000541586 IBA57-AS1B1ANH7 110 aa18.54■□□□□ 0.56
CCM2-218ENST00000541586 Q6ZR54 194 aa18.54■□□□□ 0.56
CCM2-218ENST00000541586 RYR2Q92736 4967 aa18.54■□□□□ 0.56
CCM2-218ENST00000541586 HIST1H4GQ99525 98 aa18.54■□□□□ 0.56
CCM2-218ENST00000541586 C1orf43Q9BWL3 253 aa18.53■□□□□ 0.56
CCM2-218ENST00000541586 Q9HAA7 133 aa18.52■□□□□ 0.56
CCM2-218ENST00000541586 K7EP13 123 aa18.52■□□□□ 0.55
CCM2-218ENST00000541586 TAL2Q16559 108 aa18.52■□□□□ 0.55
CCM2-218ENST00000541586 ORAOV1Q8WV07 137 aa18.52■□□□□ 0.55
CCM2-218ENST00000541586 Q8IZM0 81 aa18.51■□□□□ 0.55
CCM2-218ENST00000541586 SPANXB1Q9NS25 103 aaPredicted RBP18.5■□□□□ 0.55
CCM2-218ENST00000541586 IGKV2D-24A0A075B6R9 120 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms