RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
COPA-205ENST00000541366 SMKR1H3BMG3 65 aa6.87□□□□□ -1.31
COPA-205ENST00000541366 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
COPA-205ENST00000541366 FCER1GP30273 86 aa6.86□□□□□ -1.31
COPA-205ENST00000541366 OCC1Q8TAD7 63 aa6.86□□□□□ -1.31
COPA-205ENST00000541366 FAM104AQ969W3 186 aa6.86□□□□□ -1.31
COPA-205ENST00000541366 CSDC2Q9Y534 153 aaKnown RBP6.86□□□□□ -1.31
COPA-205ENST00000541366 IGHV3OR16-9A0A0B4J2B5 98 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
COPA-205ENST00000541366 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 PDE6DO43924 150 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 CRYGAP11844 174 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 RAB4AP20338 218 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 AMN1Q8IY45 258 aa6.84□□□□□ -1.31
COPA-205ENST00000541366 F8WDY8 70 aa6.83□□□□□ -1.32
COPA-205ENST00000541366 VCYO14598 125 aa6.83□□□□□ -1.32
COPA-205ENST00000541366 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
COPA-205ENST00000541366 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
COPA-205ENST00000541366 ZNF345Q14585 488 aa6.83□□□□□ -1.32
COPA-205ENST00000541366 KIAA0087Q14695 138 aa6.83□□□□□ -1.32
COPA-205ENST00000541366 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
COPA-205ENST00000541366 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
COPA-205ENST00000541366 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
COPA-205ENST00000541366 TMEM191AQ9H0A3 160 aa6.82□□□□□ -1.32
COPA-205ENST00000541366 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
COPA-205ENST00000541366 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 NRACQ8N912 160 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 TIMM21Q9BVV7 248 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
COPA-205ENST00000541366 KANTRA0A1W2PQU2 76 aa6.8□□□□□ -1.32
COPA-205ENST00000541366 NUPR1O60356 82 aa6.8□□□□□ -1.32
COPA-205ENST00000541366 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
COPA-205ENST00000541366 SMAGPQ0VAQ4 97 aa6.8□□□□□ -1.32
COPA-205ENST00000541366 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
COPA-205ENST00000541366 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
COPA-205ENST00000541366 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
COPA-205ENST00000541366 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
COPA-205ENST00000541366 A8MWL6 223 aa6.79□□□□□ -1.32
COPA-205ENST00000541366 SRSF3P84103 164 aaKnown RBP6.79□□□□□ -1.32
COPA-205ENST00000541366 KIR2DL4Q99706 377 aa6.79□□□□□ -1.32
COPA-205ENST00000541366 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
COPA-205ENST00000541366 IFITM10A6NMD0 228 aa6.78□□□□□ -1.32
COPA-205ENST00000541366 HIGD1CA8MV81 97 aa6.78□□□□□ -1.32
COPA-205ENST00000541366 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
COPA-205ENST00000541366 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
COPA-205ENST00000541366 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
COPA-205ENST00000541366 HMSDA8MTL9 139 aa6.77□□□□□ -1.33
COPA-205ENST00000541366 BCE1O60756 84 aa6.77□□□□□ -1.33
COPA-205ENST00000541366 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
COPA-205ENST00000541366 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
COPA-205ENST00000541366 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
COPA-205ENST00000541366 TEX46H3BTG2 121 aa6.76□□□□□ -1.33
COPA-205ENST00000541366 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
COPA-205ENST00000541366 TGIF2-C20orf24A0A0A6YYL0 155 aa6.75□□□□□ -1.33
COPA-205ENST00000541366 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
COPA-205ENST00000541366 ZNF727A8MUV8 499 aa6.75□□□□□ -1.33
COPA-205ENST00000541366 HBBP68871 147 aa6.75□□□□□ -1.33
COPA-205ENST00000541366 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
COPA-205ENST00000541366 CT83Q5H943 113 aa6.75□□□□□ -1.33
COPA-205ENST00000541366 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
COPA-205ENST00000541366 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
COPA-205ENST00000541366 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
COPA-205ENST00000541366 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
COPA-205ENST00000541366 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 PPP1R2P9O14990 202 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 TCAPO15273 167 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 PPP1R17O96001 155 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 CEBPGP53567 150 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 ZC2HC1BQ5TFG8 222 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
COPA-205ENST00000541366 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
COPA-205ENST00000541366 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
COPA-205ENST00000541366 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
COPA-205ENST00000541366 TP73-AS1Q9UF72 201 aa6.71□□□□□ -1.34
COPA-205ENST00000541366 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 TNFRSF6BO95407 300 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 RIGQ13278 110 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 C20orf78Q9BR46 151 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 SMIM2Q9BVW6 85 aa6.7□□□□□ -1.34
COPA-205ENST00000541366 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 TRBV24-1A0A075B6N3 115 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 CKS2P33552 79 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 UBE2AP49459 152 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 CKS1BP61024 79 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
COPA-205ENST00000541366 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 BATF3Q9NR55 127 aa6.69□□□□□ -1.34
COPA-205ENST00000541366 TMEM250H0YL14 139 aa6.68□□□□□ -1.34
COPA-205ENST00000541366 PRSS2P07478 247 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms