RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 Q6ZSN1 163 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 IGHV3-53P01767 116 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 DYNLRB2Q8TF09 96 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 RHOHQ15669 191 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 SMCR5Q8TEV8 140 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-210ENST00000541286 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
SFSWAP-210ENST00000541286 COX6CP09669 75 aa10.34□□□□□ -0.75
SFSWAP-210ENST00000541286 PF4P02776 101 aa10.34□□□□□ -0.75
SFSWAP-210ENST00000541286 PRB2P02812 416 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-210ENST00000541286 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
SFSWAP-210ENST00000541286 HERVK_113P63121 156 aa10.33□□□□□ -0.76
SFSWAP-210ENST00000541286 TENM3Q9P273 2699 aa10.32□□□□□ -0.76
SFSWAP-210ENST00000541286 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
SFSWAP-210ENST00000541286 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 Q6Q795 121 aa10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 CSDC2Q9Y534 153 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-210ENST00000541286 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SFSWAP-210ENST00000541286 CYSTM1Q9H1C7 97 aa10.3□□□□□ -0.76
SFSWAP-210ENST00000541286 Q9HAA7 133 aa10.3□□□□□ -0.76
SFSWAP-210ENST00000541286 GAGE2AQ6NT46 116 aa10.29□□□□□ -0.76
SFSWAP-210ENST00000541286 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
SFSWAP-210ENST00000541286 FAM19A5Q7Z5A7 132 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-210ENST00000541286 LITAFQ99732 161 aa10.29□□□□□ -0.76
SFSWAP-210ENST00000541286 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
SFSWAP-210ENST00000541286 TRGV1A0A0A0MS02 117 aa10.28□□□□□ -0.76
SFSWAP-210ENST00000541286 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
SFSWAP-210ENST00000541286 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.77
SFSWAP-210ENST00000541286 CDKN2A-AS1Q9UH64 79 aa10.27□□□□□ -0.77
SFSWAP-210ENST00000541286 LST1O00453 97 aa10.27□□□□□ -0.77
SFSWAP-210ENST00000541286 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
SFSWAP-210ENST00000541286 DAZ2Q13117 558 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 C3orf22Q8N5N4 141 aa10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
SFSWAP-210ENST00000541286 IGHV1-58A0A0C4DH39 117 aa10.25□□□□□ -0.77
SFSWAP-210ENST00000541286 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
SFSWAP-210ENST00000541286 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 A0A087WVE0 104 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 H3BT86 120 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 TGP01266 2768 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 CHCHD7Q9BUK0 85 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
SFSWAP-210ENST00000541286 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
SFSWAP-210ENST00000541286 PEMTQ9UBM1 199 aa10.23□□□□□ -0.77
SFSWAP-210ENST00000541286 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
SFSWAP-210ENST00000541286 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
SFSWAP-210ENST00000541286 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
SFSWAP-210ENST00000541286 MIAQ16674 131 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 STHQ8IWL8 128 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 INSP01308 110 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 C5orf47Q569G3 176 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 COX6A2Q02221 97 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 DSCR8Q96T75 97 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 Q9H8V8 135 aa10.22□□□□□ -0.77
SFSWAP-210ENST00000541286 TRBV7-7A0A0K0K1E9 115 aa10.21□□□□□ -0.78
SFSWAP-210ENST00000541286 FAM218AQ96MZ4 157 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 TIRAPP58753 221 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 PIK3CD-AS1Q5SR53 167 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
SFSWAP-210ENST00000541286 Q6ZTI0 123 aa10.19□□□□□ -0.78
SFSWAP-210ENST00000541286 SPANXA1Q9NS26 97 aa10.19□□□□□ -0.78
SFSWAP-210ENST00000541286 TOMM7Q9P0U1 55 aa10.19□□□□□ -0.78
SFSWAP-210ENST00000541286 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
SFSWAP-210ENST00000541286 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
SFSWAP-210ENST00000541286 UQCRQO14949 82 aa10.18□□□□□ -0.78
SFSWAP-210ENST00000541286 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
SFSWAP-210ENST00000541286 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
SFSWAP-210ENST00000541286 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
SFSWAP-210ENST00000541286 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
SFSWAP-210ENST00000541286 C4orf26Q17RF5 130 aa10.17□□□□□ -0.78
SFSWAP-210ENST00000541286 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
SFSWAP-210ENST00000541286 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
SFSWAP-210ENST00000541286 A0A1B0GX51 115 aa10.16□□□□□ -0.78
SFSWAP-210ENST00000541286 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
SFSWAP-210ENST00000541286 WFDC9Q8NEX5 89 aa10.16□□□□□ -0.78
SFSWAP-210ENST00000541286 STAB2Q8WWQ8 2551 aa10.16□□□□□ -0.78
SFSWAP-210ENST00000541286 TRGV2A0A075B6R0 118 aa10.16□□□□□ -0.78
SFSWAP-210ENST00000541286 ATP5G1P05496 136 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms