RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 ADCYAP1P18509 176 aa13.3□□□□□ -0.28
PTMS-205ENST00000540828 STPG4Q8N801 248 aa13.3□□□□□ -0.28
PTMS-205ENST00000540828 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
PTMS-205ENST00000540828 FAT3Q8TDW7 4589 aa13.3□□□□□ -0.28
PTMS-205ENST00000540828 IGHV3OR16-9A0A0B4J2B5 98 aa13.29□□□□□ -0.28
PTMS-205ENST00000540828 Q6ZRU5 148 aa13.29□□□□□ -0.28
PTMS-205ENST00000540828 Q8N8P6 123 aa13.29□□□□□ -0.28
PTMS-205ENST00000540828 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
PTMS-205ENST00000540828 IFI27P40305 119 aaPredicted RBP13.28□□□□□ -0.28
PTMS-205ENST00000540828 CTDSP1Q9GZU7 261 aa13.28□□□□□ -0.28
PTMS-205ENST00000540828 IFITM10A6NMD0 228 aa13.27□□□□□ -0.29
PTMS-205ENST00000540828 C7orf33Q8WU49 177 aa13.27□□□□□ -0.29
PTMS-205ENST00000540828 CAMK2N2Q96S95 79 aa13.27□□□□□ -0.29
PTMS-205ENST00000540828 IGLV4-3A0A075B6K6 122 aa13.25□□□□□ -0.29
PTMS-205ENST00000540828 OR10D4PQ8NGN7 298 aa13.25□□□□□ -0.29
PTMS-205ENST00000540828 LOC107984640A0A0U1RRK4 108 aa13.24□□□□□ -0.29
PTMS-205ENST00000540828 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
PTMS-205ENST00000540828 SPAG11BQ08648 103 aa13.24□□□□□ -0.29
PTMS-205ENST00000540828 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
PTMS-205ENST00000540828 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
PTMS-205ENST00000540828 K7EMI3 77 aa13.23□□□□□ -0.29
PTMS-205ENST00000540828 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
PTMS-205ENST00000540828 F8WDY8 70 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 GAGE2BQ13066 116 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 RNF151Q2KHN1 245 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 C2orf66Q6UXQ4 117 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 ORAOV1Q8WV07 137 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
PTMS-205ENST00000540828 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
PTMS-205ENST00000540828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.2□□□□□ -0.3
PTMS-205ENST00000540828 A0A087WZ39 114 aa13.19□□□□□ -0.3
PTMS-205ENST00000540828 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
PTMS-205ENST00000540828 KIAA1644Q3SXP7 199 aa13.19□□□□□ -0.3
PTMS-205ENST00000540828 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
PTMS-205ENST00000540828 COMMD7Q86VX2 200 aa13.19□□□□□ -0.3
PTMS-205ENST00000540828 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
PTMS-205ENST00000540828 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
PTMS-205ENST00000540828 NPSP0C0P6 89 aa13.18□□□□□ -0.3
PTMS-205ENST00000540828 UBE2D1P51668 147 aa13.18□□□□□ -0.3
PTMS-205ENST00000540828 AMELXQ99217 191 aa13.18□□□□□ -0.3
PTMS-205ENST00000540828 A0A0J9YXV3 536 aa13.17□□□□□ -0.3
PTMS-205ENST00000540828 PRR3P79522 188 aaKnown RBP13.17□□□□□ -0.3
PTMS-205ENST00000540828 C10orf91Q5T1B1 145 aa13.17□□□□□ -0.3
PTMS-205ENST00000540828 LINC00173Q6ZV60 143 aa13.17□□□□□ -0.3
PTMS-205ENST00000540828 VCX2Q9H322 139 aa13.17□□□□□ -0.3
PTMS-205ENST00000540828 A0A1W2PNN7 141 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 NDUFA1O15239 70 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 S100PP25815 95 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 KIAA0087Q14695 138 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 ZC2HC1BQ5TFG8 222 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 Q6ZN92 141 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 GNB1LQ9BYB4 327 aa13.16□□□□□ -0.3
PTMS-205ENST00000540828 G0S2P27469 103 aa13.15□□□□□ -0.3
PTMS-205ENST00000540828 C10orf25Q5T742 122 aa13.15□□□□□ -0.3
PTMS-205ENST00000540828 UNQ6190/PRO20217Q6UXQ8 127 aa13.15□□□□□ -0.3
PTMS-205ENST00000540828 LINC01561Q8N1V8 128 aa13.15□□□□□ -0.3
PTMS-205ENST00000540828 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
PTMS-205ENST00000540828 FAM19A3Q7Z5A8 133 aa13.13□□□□□ -0.31
PTMS-205ENST00000540828 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
PTMS-205ENST00000540828 TLX1NBP0CAT3 122 aa13.12□□□□□ -0.31
PTMS-205ENST00000540828 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
PTMS-205ENST00000540828 TOMM6Q96B49 74 aa13.12□□□□□ -0.31
PTMS-205ENST00000540828 C6orf48Q9UBA6 75 aa13.12□□□□□ -0.31
PTMS-205ENST00000540828 MT1HL1P0DM35 61 aa13.11□□□□□ -0.31
PTMS-205ENST00000540828 COX19Q49B96 90 aa13.11□□□□□ -0.31
PTMS-205ENST00000540828 SERTAD4-AS1Q5TG53 156 aa13.11□□□□□ -0.31
PTMS-205ENST00000540828 TIMM17AQ99595 171 aa13.11□□□□□ -0.31
PTMS-205ENST00000540828 ALKBH7Q9BT30 221 aaPredicted RBP13.11□□□□□ -0.31
PTMS-205ENST00000540828 RHEBQ15382 184 aa13.1□□□□□ -0.31
PTMS-205ENST00000540828 PAPPA-AS1Q5QFB9 102 aa13.1□□□□□ -0.31
PTMS-205ENST00000540828 Q6ZRP5 223 aa13.1□□□□□ -0.31
PTMS-205ENST00000540828 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
PTMS-205ENST00000540828 RPS10P5Q9NQ39 176 aa13.09□□□□□ -0.31
PTMS-205ENST00000540828 MT-ND6P03923 174 aa13.07□□□□□ -0.32
PTMS-205ENST00000540828 SEC11AP67812 179 aa13.07□□□□□ -0.32
PTMS-205ENST00000540828 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTMS-205ENST00000540828 ERASQ7Z444 233 aa13.07□□□□□ -0.32
PTMS-205ENST00000540828 TRBV30A0A0K0K1B3 111 aa13.06□□□□□ -0.32
PTMS-205ENST00000540828 FABP9Q0Z7S8 132 aa13.06□□□□□ -0.32
PTMS-205ENST00000540828 SPINK6Q6UWN8 80 aa13.06□□□□□ -0.32
PTMS-205ENST00000540828 C2orf82Q6UX34 121 aa13.06□□□□□ -0.32
PTMS-205ENST00000540828 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
PTMS-205ENST00000540828 MRPL18Q9H0U6 180 aaKnown RBP13.06□□□□□ -0.32
PTMS-205ENST00000540828 HERVK_113P63121 156 aa13.05□□□□□ -0.32
PTMS-205ENST00000540828 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
PTMS-205ENST00000540828 PHF5AQ7RTV0 110 aaKnown RBP13.04□□□□□ -0.32
PTMS-205ENST00000540828 HMCN2Q8NDA2 5059 aa13.03□□□□□ -0.32
PTMS-205ENST00000540828 GAGE2EQ4V326 116 aa13.03□□□□□ -0.32
PTMS-205ENST00000540828 PACRGQ96M98 296 aaPredicted RBP13.03□□□□□ -0.32
PTMS-205ENST00000540828 GAGE2DQ9UEU5 116 aa13.03□□□□□ -0.32
PTMS-205ENST00000540828 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
PTMS-205ENST00000540828 PRSS2P07478 247 aa13.02□□□□□ -0.33
PTMS-205ENST00000540828 LINC01600Q96MT4 127 aa13.02□□□□□ -0.33
PTMS-205ENST00000540828 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
PTMS-205ENST00000540828 PSORS1C2Q9UIG4 136 aa13.02□□□□□ -0.33
PTMS-205ENST00000540828 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
PTMS-205ENST00000540828 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms