RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 TEX261Q6UWH6 196 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 LINC00469Q8N7U9 141 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 GNG13Q9P2W3 67 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 K7EN84 100 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 ARPC5O15511 151 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 NUPR1O60356 82 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 H2AFB1P0C5Y9 115 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 TMEM241Q24JQ0 296 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 LINC00299Q6ZSB3 139 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 SMIM15Q7Z3B0 74 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 CSDC2Q9Y534 153 aaKnown RBP4.55□□□□□ -1.68
LRP6-204ENST00000540415 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
LRP6-204ENST00000540415 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
LRP6-204ENST00000540415 NDUFC2-KCTD14E9PQ53 114 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 F8WDY8 70 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 SMLR1H3BR10 107 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
LRP6-204ENST00000540415 FCER1GP30273 86 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
LRP6-204ENST00000540415 RPL39P62891 51 aaKnown RBP4.54□□□□□ -1.68
LRP6-204ENST00000540415 MT1HP80294 61 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 CT83Q5H943 113 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
LRP6-204ENST00000540415 BCE1O60756 84 aa4.53□□□□□ -1.68
LRP6-204ENST00000540415 KRTAP13-3Q3SY46 172 aa4.53□□□□□ -1.68
LRP6-204ENST00000540415 SMIM12Q96EX1 92 aa4.53□□□□□ -1.68
LRP6-204ENST00000540415 MANBALQ9NQG1 85 aa4.53□□□□□ -1.68
LRP6-204ENST00000540415 MED9Q9NWA0 146 aa4.53□□□□□ -1.68
LRP6-204ENST00000540415 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 RPL37AP8A6NKH3 93 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 RAB4AP20338 218 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 KRTAP13-1Q8IUC0 172 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 NDUFA13Q9P0J0 144 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 USH2AO75445 5202 aa4.52□□□□□ -1.69
LRP6-204ENST00000540415 UMAD1C9J7I0 102 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 VCYO14598 125 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
LRP6-204ENST00000540415 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 NRACQ8N912 160 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 OCC1Q8TAD7 63 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 BIN3Q9NQY0 253 aa4.51□□□□□ -1.69
LRP6-204ENST00000540415 IGKV2D-26A0A0A0MRZ7 120 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 ZNF727A8MUV8 499 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
LRP6-204ENST00000540415 FAM229BQ4G0N7 80 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
LRP6-204ENST00000540415 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
LRP6-204ENST00000540415 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
LRP6-204ENST00000540415 LINC00167Q96N53 147 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 FAM210AQ96ND0 272 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 TMEM191AQ9H0A3 160 aa4.5□□□□□ -1.69
LRP6-204ENST00000540415 GATCO43716 136 aaKnown RBP4.49□□□□□ -1.69
LRP6-204ENST00000540415 PDE6DO43924 150 aa4.49□□□□□ -1.69
LRP6-204ENST00000540415 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
LRP6-204ENST00000540415 TGIF2-C20orf24A0A0A6YYL0 155 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 SCO1O75880 301 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 SCGB1D1O95968 90 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 UBE2AP49459 152 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
LRP6-204ENST00000540415 HBBP68871 147 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 KIR2DL4Q99706 377 aa4.48□□□□□ -1.69
LRP6-204ENST00000540415 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
LRP6-204ENST00000540415 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
LRP6-204ENST00000540415 PRLHP81277 87 aa4.47□□□□□ -1.69
LRP6-204ENST00000540415 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
LRP6-204ENST00000540415 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
LRP6-204ENST00000540415 TP73-AS1Q9UF72 201 aa4.47□□□□□ -1.69
LRP6-204ENST00000540415 HIGD1CA8MV81 97 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 A8MWL6 223 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 CFC1BP0CG36 223 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
LRP6-204ENST00000540415 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
LRP6-204ENST00000540415 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 SPANXA1Q9NS26 97 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
LRP6-204ENST00000540415 TCAPO15273 167 aa4.45□□□□□ -1.7
LRP6-204ENST00000540415 PNRC1Q12796 327 aaPredicted RBP4.45□□□□□ -1.7
LRP6-204ENST00000540415 ZNF345Q14585 488 aa4.45□□□□□ -1.7
LRP6-204ENST00000540415 MRPL51Q4U2R6 128 aaKnown RBP4.45□□□□□ -1.7
LRP6-204ENST00000540415 FAM231DQ6ZW35 169 aa4.45□□□□□ -1.7
LRP6-204ENST00000540415 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
LRP6-204ENST00000540415 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 IGKV2-28A0A075B6P5 120 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 IGKV2D-28P01615 120 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 CKS1BP61024 79 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 CTAG1AP78358 180 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 DAND5Q8N907 189 aa4.44□□□□□ -1.7
LRP6-204ENST00000540415 TMEM238C9JI98 176 aa4.43□□□□□ -1.7
LRP6-204ENST00000540415 PPP1R2P9O14990 202 aa4.43□□□□□ -1.7
LRP6-204ENST00000540415 PRSS2P07478 247 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms