RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 COX7BP24311 80 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 PKDREJQ9NTG1 2253 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 IGHV4-30-2A0A087WSY4 118 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 CEP295Q9C0D2 2601 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 WNK2Q9Y3S1 2297 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 A0A0J9YWU9 116 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 A0A096LNJ9 63 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 FAM19A1Q7Z5A9 133 aa4.47□□□□□ -1.69
PTPRD-214ENST00000540109 H3BUX3 64 aa4.46□□□□□ -1.69
PTPRD-214ENST00000540109 PRYO14603 147 aa4.46□□□□□ -1.69
PTPRD-214ENST00000540109 GPHB5Q86YW7 130 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 PSMG3-AS1Q96PY0 264 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB1P60022 68 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 BEAN1Q3B7T3 259 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 FAM30AQ9NZY2 134 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 ARHGAP32A7KAX9 2087 aa4.46□□□□□ -1.7
PTPRD-214ENST00000540109 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 NAV3Q8IVL0 2385 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 G3V318 75 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB114Q30KQ6 69 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 PCNX1Q96RV3 2341 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 K7EQD1 137 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 C16orf74Q96GX8 76 aa4.45□□□□□ -1.7
PTPRD-214ENST00000540109 AKAP13Q12802 2813 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 A0A0C4DFX4 3053 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 CELA1Q9UNI1 258 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 FSHBP01225 129 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 VCANP13611 3396 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 IGHV4-38-2P0DP08 117 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 LINC00846Q9NV44 126 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 DHRS4-AS1Q9P1J3 65 aa4.44□□□□□ -1.7
PTPRD-214ENST00000540109 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 IGF2RP11717 2491 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 ROS1P08922 2347 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 ETDCA0A1B0GVM5 59 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 BRD3OSQ6XYD6 125 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 NACAE9PAV3 2078 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB131AP59861 70 aa4.43□□□□□ -1.7
PTPRD-214ENST00000540109 PLXNB1O43157 2135 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 FHL2Q14192 279 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 A0A096LPF7 62 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 Q6YL49 198 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 NTM-AS1Q6ZSK4 140 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 A0A096LNT2 108 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB130BP0DP73 79 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB130AP0DP74 79 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 REG3AQ06141 175 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 DNAJC9-AS1A6NH13 148 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 IGHV4-59P01825 116 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
PTPRD-214ENST00000540109 CACNA1AO00555 2505 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 KLKP1Q107X0 134 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 ZNF843Q8N446 348 aa4.42□□□□□ -1.7
PTPRD-214ENST00000540109 Q8N2B8 174 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 LINC00482Q8N8I6 264 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 C3orf84H3BNL1 204 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 Q8N3U1 123 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 M0QY20 66 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 SMIM11BQ8TCY0 68 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 CACNA1BQ00975 2339 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 HIGD2AQ9BW72 106 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 PIEZO2Q9H5I5 2752 aa4.41□□□□□ -1.7
PTPRD-214ENST00000540109 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 WFDC10BQ8IUB3 73 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 A0A087WYN8 130 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 PLA2G2AP14555 144 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 DCANP1Q8TF63 244 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 AMELXQ99217 191 aa4.4□□□□□ -1.7
PTPRD-214ENST00000540109 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 USP34Q70CQ2 3546 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 HIVEP3Q5T1R4 2406 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 IGLV10-54A0A075B6I4 117 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 HCG22E2RYF7 251 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 TRBV6-4A0A1B0GX49 114 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 Q9UF83 564 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 COL6A6A6NMZ7 2263 aa4.4□□□□□ -1.71
PTPRD-214ENST00000540109 AGRNO00468 2067 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 IGLV4-69A0A075B6H9 119 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 Q8IZM0 81 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 COL6A3P12111 3177 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 Q8N9L7 120 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 LINC00467Q9BRT7 94 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 PIEZO1Q92508 2521 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 FRYLO94915 3013 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 ZFAND2AQ8N6M9 145 aa4.39□□□□□ -1.71
PTPRD-214ENST00000540109 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 LOC110117498A0A087WWA1 95 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 KLLNB2CW77 178 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms