RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
SNRPA1-203ENST00000540017 MALP21145 153 aa11.69□□□□□ -0.54
SNRPA1-203ENST00000540017 LINC00173Q6ZV60 143 aa11.69□□□□□ -0.54
SNRPA1-203ENST00000540017 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
SNRPA1-203ENST00000540017 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
SNRPA1-203ENST00000540017 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-203ENST00000540017 SLC7A5P1Q8MH63 180 aa11.68□□□□□ -0.54
SNRPA1-203ENST00000540017 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
SNRPA1-203ENST00000540017 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-203ENST00000540017 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
SNRPA1-203ENST00000540017 COX6A2Q02221 97 aa11.67□□□□□ -0.54
SNRPA1-203ENST00000540017 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
SNRPA1-203ENST00000540017 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SNRPA1-203ENST00000540017 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
SNRPA1-203ENST00000540017 LINC00242Q5T6M2 205 aa11.66□□□□□ -0.54
SNRPA1-203ENST00000540017 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
SNRPA1-203ENST00000540017 AMELXQ99217 191 aa11.66□□□□□ -0.54
SNRPA1-203ENST00000540017 UBE2D1P51668 147 aa11.65□□□□□ -0.54
SNRPA1-203ENST00000540017 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
SNRPA1-203ENST00000540017 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
SNRPA1-203ENST00000540017 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
SNRPA1-203ENST00000540017 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
SNRPA1-203ENST00000540017 SPACA4Q8TDM5 124 aa11.64□□□□□ -0.55
SNRPA1-203ENST00000540017 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
SNRPA1-203ENST00000540017 NPSP0C0P6 89 aa11.63□□□□□ -0.55
SNRPA1-203ENST00000540017 Q6ZRU5 148 aa11.63□□□□□ -0.55
SNRPA1-203ENST00000540017 VCX2Q9H322 139 aa11.63□□□□□ -0.55
SNRPA1-203ENST00000540017 APOMO95445 188 aa11.62□□□□□ -0.55
SNRPA1-203ENST00000540017 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-203ENST00000540017 Q6ZN92 141 aa11.62□□□□□ -0.55
SNRPA1-203ENST00000540017 A0A087WYN8 130 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 A0A096LNI7 61 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 G0S2P27469 103 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 TIMM17AQ99595 171 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 C2orf88Q9BSF0 95 aa11.61□□□□□ -0.55
SNRPA1-203ENST00000540017 A0A087WZ39 114 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 FA2HQ7L5A8 372 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 ERASQ7Z444 233 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 CBLN2Q8IUK8 224 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 C18orf32Q8TCD1 76 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 DPH3Q96FX2 82 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
SNRPA1-203ENST00000540017 MAJINQ3KP22 176 aa11.58□□□□□ -0.56
SNRPA1-203ENST00000540017 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
SNRPA1-203ENST00000540017 SMCO4Q9NRQ5 59 aa11.58□□□□□ -0.56
SNRPA1-203ENST00000540017 A0A096LNJ9 63 aa11.57□□□□□ -0.56
SNRPA1-203ENST00000540017 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
SNRPA1-203ENST00000540017 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
SNRPA1-203ENST00000540017 A0A0J9YXV3 536 aa11.56□□□□□ -0.56
SNRPA1-203ENST00000540017 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
SNRPA1-203ENST00000540017 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
SNRPA1-203ENST00000540017 MYCBP2O75592 4640 aa11.55□□□□□ -0.56
SNRPA1-203ENST00000540017 LINC00614P0C842 121 aa11.55□□□□□ -0.56
SNRPA1-203ENST00000540017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-203ENST00000540017 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
SNRPA1-203ENST00000540017 STPG4Q8N801 248 aa11.54□□□□□ -0.56
SNRPA1-203ENST00000540017 FLG2Q5D862 2391 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 PMCHL1Q16048 86 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
SNRPA1-203ENST00000540017 NDUFA1O15239 70 aa11.52□□□□□ -0.57
SNRPA1-203ENST00000540017 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
SNRPA1-203ENST00000540017 RNF151Q2KHN1 245 aa11.52□□□□□ -0.57
SNRPA1-203ENST00000540017 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
SNRPA1-203ENST00000540017 MRPL35Q9NZE8 188 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-203ENST00000540017 F8WDY8 70 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 HERVK_113P63121 156 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 C2orf82Q6UX34 121 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 C6orf48Q9UBA6 75 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
SNRPA1-203ENST00000540017 SEC11AP67812 179 aa11.5□□□□□ -0.57
SNRPA1-203ENST00000540017 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-203ENST00000540017 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-203ENST00000540017 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-203ENST00000540017 PMVKQ15126 192 aa11.49□□□□□ -0.57
SNRPA1-203ENST00000540017 PKHD1L1Q86WI1 4243 aa11.49□□□□□ -0.57
SNRPA1-203ENST00000540017 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
SNRPA1-203ENST00000540017 HBDP02042 147 aa11.48□□□□□ -0.57
SNRPA1-203ENST00000540017 PDZD11Q5EBL8 140 aa11.48□□□□□ -0.57
SNRPA1-203ENST00000540017 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
SNRPA1-203ENST00000540017 TRGC2P03986 189 aa11.47□□□□□ -0.57
SNRPA1-203ENST00000540017 RAB5BP61020 215 aa11.47□□□□□ -0.57
SNRPA1-203ENST00000540017 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
SNRPA1-203ENST00000540017 TOMM7Q9P0U1 55 aa11.47□□□□□ -0.57
SNRPA1-203ENST00000540017 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
SNRPA1-203ENST00000540017 Q6ZRP5 223 aa11.46□□□□□ -0.57
SNRPA1-203ENST00000540017 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms